Analysis of interatomic Contacts of Structural Units in PDB entry:
5MZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5MZA entry

There are 2 chains in PDB entry 5MZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 727CYS 1214
B
 GLN 1GLY 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5MZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
740 760Right-handed alpha
Helix 2
AA2
A
761 766Right-handed alpha
Helix 3
AA3
A
768 772Right-handed 310
Helix 4
AA4
A
781 786Right-handed alpha
Helix 5
AA5
A
787 790Right-handed 310
Helix 6
AA6
A
836 841Right-handed alpha
Helix 7
AA7
A
844 849Right-handed alpha
Helix 8
AA8
A
856 861Right-handed 310
Helix 9
AA9
A
865 889Right-handed alpha
Helix 10
AB1
A
894 914Right-handed alpha
Helix 11
AB2
A
922 942Right-handed alpha
Helix 12
AB3
A
944 949Right-handed alpha
Helix 13
AB4
A
956 975Right-handed alpha
Helix 14
AB5
A
992 996Right-handed 310
Helix 15
AB6
A
997 1020Right-handed alpha
Helix 16
AB7
A
1021 1024Right-handed 310
Helix 17
AB8
A
1041 1083Right-handed alpha
Helix 18
AB9
A
1093 1095Right-handed 310
Helix 19
AC1
A
1096 1110Right-handed alpha
Helix 20
AC2
A
1157 1160Right-handed 310
Helix 21
AC3
A
1161 1170Right-handed alpha
Helix 22
AC4
A
1205 1207Right-handed 310
Helix 23
AC5
A
1208 1213Right-handed alpha
Helix 24
AC6
B
115 117Right-handed 310
Helix 25
AC7
B
149 153Right-handed 310
Helix 26
AC8
B
166 169Right-handed 310
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There are 8 sheets in PDB entry 5MZA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
822 823first strand
Strand 2
A
834 835anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
15 23anti-parallel
Strand 3
B
49 57anti-parallel
Strand 4
B
39 42anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
79 83parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
64 69anti-parallel
Strand 3
B
72 77anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 91first strand
Strand 2
B
103 111anti-parallel
Strand 3
B
140 147anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 99first strand
Strand 2
B
183 185parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 134first strand
Strand 2
B
119 125anti-parallel
Strand 3
B
156 164anti-parallel
Strand 4
B
172 176anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 134first strand
Strand 2
B
119 125anti-parallel
Strand 3
B
156 164anti-parallel
Strand 4
B
180 181anti-parallel
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