Analysis of interatomic Contacts of Structural Units in PDB entry:
5N2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5N2H entry

There is 1 chain in PDB entry 5N2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3GLU 1005
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5N2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 49Right-handed alpha
Helix 2
AA2
A
108 118Right-handed alpha
Helix 3
AA3
A
128 130Right-handed 310
Helix 4
AA4
A
144 149Right-handed alpha
Helix 5
AA5
A
206 208Right-handed 310
Helix 6
AA6
A
209 220Right-handed alpha
Helix 7
AA7
A
226 230Right-handed 310
Helix 8
AA8
A
240 254Right-handed alpha
Helix 9
AA9
A
267 280Right-handed alpha
Helix 10
AB1
A
331 339Right-handed alpha
Helix 11
AB2
A
345 354Right-handed alpha
Helix 12
AB3
A
380 390Right-handed alpha
Helix 13
AB4
A
439 446Right-handed alpha
Helix 14
AB5
A
448 473Right-handed alpha
Helix 15
AB6
A
474 487Right-handed alpha
Helix 16
AB7
A
497 502Right-handed alpha
Helix 17
AB8
A
502 513Right-handed alpha
Helix 18
AB9
A
552 562Right-handed alpha
Helix 19
AC1
A
576 591Right-handed alpha
Helix 20
AC2
A
621 644Right-handed alpha
Helix 21
AC3
A
646 673Right-handed alpha
Helix 22
AC4
A
680 703Right-handed alpha
Helix 23
AC5
A
763 781Right-handed alpha
Helix 24
AC6
A
836 856Right-handed alpha
Helix 25
AC7
A
861 883Right-handed alpha
Helix 26
AC8
A
886 891Right-handed 310
Helix 27
AC9
A
905 918Right-handed alpha
Helix 28
AD1
A
946 949Right-handed 310
Helix 29
AD2
A
967 983Right-handed alpha
Helix 30
AD3
A
986 998Right-handed alpha
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There are 10 sheets in PDB entry 5N2H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 134first strand
Strand 2
A
139 142anti-parallel
Strand 3
A
29 35parallel
Strand 4
A
17 24anti-parallel
Strand 5
A
2 10anti-parallel
Strand 6
A
124 126anti-parallel
Strand 7
A
151 153anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
83 93anti-parallel
Strand 3
A
56 67anti-parallel
Strand 4
A
515 518parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
568 574parallel
Strand 3
A
610 616anti-parallel
Strand 4
A
596 600anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
236 239parallel
Strand 3
A
197 204parallel
Strand 4
A
183 191anti-parallel
Strand 5
A
162 169anti-parallel
Strand 6
A
258 261parallel
Strand 7
A
327 330parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 287first strand
Strand 2
A
294 296anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 303first strand
Strand 2
A
316 319anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 362first strand
Strand 2
A
368 372anti-parallel
Strand 3
A
415 419anti-parallel
Strand 4
A
401 410anti-parallel
Strand 5
A
394 397anti-parallel
Strand 6
A
428 432anti-parallel
Strand 7
A
355 362anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
732 734first strand
Strand 2
A
711 713anti-parallel
Strand 3
A
706 708anti-parallel
Strand 4
A
743 750anti-parallel
Strand 5
A
754 759anti-parallel
Strand 6
A
545 550anti-parallel
Strand 7
A
789 800anti-parallel
Strand 8
A
806 812anti-parallel
Strand 9
A
822 825anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 895first strand
Strand 2
A
927 935anti-parallel
Strand 3
A
951 953anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 895first strand
Strand 2
A
927 935anti-parallel
Strand 3
A
964 966anti-parallel
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