Analysis of interatomic Contacts of Structural Units in PDB entry:
5N72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5N72 entry

There is 1 chain in PDB entry 5N72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 24THR 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5N72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 45Right-handed alpha
Helix 2
AA2
A
56 107Right-handed alpha
Helix 3
AA3
A
113 165Right-handed alpha
Helix 4
AA4
A
183 187Right-handed 310
Helix 5
AA5
A
189 202Right-handed alpha
Helix 6
AA6
A
211 225Right-handed alpha
Helix 7
AA7
A
241 253Right-handed alpha
Helix 8
AA8
A
257 269Right-handed alpha
Helix 9
AA9
A
296 306Right-handed alpha
Helix 10
AB1
A
313 334Right-handed alpha
Helix 11
AB2
A
337 342Right-handed alpha
Helix 12
AB3
A
348 352Right-handed 310
Helix 13
AB4
A
353 360Right-handed alpha
Helix 14
AB5
A
360 368Right-handed alpha
Helix 15
AB6
A
371 375Right-handed 310
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There are 4 sheets in PDB entry 5N72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
173 177parallel
Strand 3
A
206 209parallel
Strand 4
A
273 274parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
166 168anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
284 289anti-parallel
Strand 3
A
387 393parallel
Strand 4
A
383 384anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
284 289anti-parallel
Strand 3
A
387 393parallel
Strand 4
A
405 407parallel
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