Analysis of interatomic Contacts of Structural Units in PDB entry:
5N76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5N76 entry

There are 6 chains in PDB entry 5N76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 2GLU 63
D
 CYS 2GLU 63
B
 CYS 2GLN 64
C
 CYS 2GLN 64
E
 CYS 2GLU 63
F
 CYS 2GLU 63
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5N76

There are 4 sheets in PDB entry 5N76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
5 9anti-parallel
Strand 3
A
57 62parallel
Strand 4
A
46 52anti-parallel
Strand 5
D
21 27anti-parallel
Strand 6
D
30 35anti-parallel
Strand 7
D
40 44anti-parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
21 27anti-parallel
Strand 4
D
46 52anti-parallel
Strand 5
D
57 62anti-parallel
Strand 6
D
5 9parallel
Strand 7
D
15 18anti-parallel
Strand 8
B
39 44anti-parallel
Strand 9
B
30 35anti-parallel
Strand 10
B
21 27anti-parallel
Strand 11
C
46 52anti-parallel
Strand 12
C
57 62anti-parallel
Strand 13
C
5 9parallel
Strand 14
C
15 18anti-parallel
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There are 14 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 44first strand
Strand 2
C
30 35anti-parallel
Strand 3
C
21 27anti-parallel
Strand 4
B
46 52anti-parallel
Strand 5
B
57 62anti-parallel
Strand 6
B
5 9parallel
Strand 7
B
15 18anti-parallel
Strand 8
F
39 44anti-parallel
Strand 9
F
30 35anti-parallel
Strand 10
F
21 27anti-parallel
Strand 11
E
46 52anti-parallel
Strand 12
E
57 62anti-parallel
Strand 13
E
5 9parallel
Strand 14
E
15 18anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
40 44first strand
Strand 2
E
30 35anti-parallel
Strand 3
E
21 27anti-parallel
Strand 4
F
46 52anti-parallel
Strand 5
F
57 62anti-parallel
Strand 6
F
5 8parallel
Strand 7
F
16 18anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il