Analysis of interatomic Contacts of Structural Units in PDB entry:
5N82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5N82 entry

There is 1 chain in PDB entry 5N82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 30ILE 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5N82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 50Right-handed alpha
Helix 2
AA2
A
65 82Right-handed alpha
Helix 3
AA3
A
97 110Right-handed alpha
Helix 4
AA4
A
122 134Right-handed alpha
Helix 5
AA5
A
141 151Right-handed alpha
Helix 6
AA6
A
202 216Right-handed alpha
Helix 7
AA7
A
233 244Right-handed alpha
Helix 8
AA8
A
253 259Right-handed alpha
Helix 9
AA9
A
259 270Right-handed alpha
Helix 10
AB1
A
278 284Right-handed alpha
Helix 11
AB2
A
285 290Right-handed 310
Helix 12
AB3
A
304 312Right-handed alpha
Helix 13
AB4
A
323 327Right-handed 310
Helix 14
AB5
A
387 394Right-handed alpha
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There are 6 sheets in PDB entry 5N82. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
54 58anti-parallel
Strand 3
A
248 251parallel
Strand 4
A
223 226parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 116first strand
Strand 2
A
89 93parallel
Strand 3
A
137 140parallel
Strand 4
A
156 159parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 188first strand
Strand 2
A
196 201anti-parallel
Strand 3
A
383 384anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
295 299parallel
Strand 3
A
316 321parallel
Strand 4
A
330 333anti-parallel
Strand 5
A
348 349anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
Strand 2
A
371 377anti-parallel
Strand 3
A
405 415anti-parallel
Strand 4
A
395 397anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
Strand 2
A
371 377anti-parallel
Strand 3
A
405 415anti-parallel
Strand 4
A
421 426anti-parallel
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