Analysis of interatomic Contacts of Structural Units in PDB entry:
5N85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5N85 entry

There are 2 chains in PDB entry 5N85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLU 120
B
 ASP 1ALA 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5N85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 5Right-handed 310
Helix 2
AA2
A
8 17Right-handed alpha
Helix 3
AA3
A
62 68Right-handed alpha
Helix 4
AA4
A
104 109Right-handed alpha
Helix 5
AA5
B
5 9Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5N85.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
51 58parallel
Strand 3
A
92 103parallel
Strand 4
A
76 86anti-parallel
Strand 5
A
24 33anti-parallel
Strand 6
A
41 47anti-parallel
Strand 7
A
51 58anti-parallel
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