Analysis of interatomic Contacts of Structural Units in PDB entry:
5NL1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NL1 entry

There are 12 chains in PDB entry 5NL1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 488PRO 628
B
 PRO 487PRO 628
C
 THR 489PRO 628
D
 LEU 488PRO 628
E
 PRO 487PRO 628
F
 PRO 487PRO 628
G
 GLU 4GLY 25
H
 ARG 3GLY 25
I
 ARG 3GLY 25
J
 SER -1ILE 24
K
 SER -1GLY 25
L
 GLU 4GLY 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5NL1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
489 513Right-handed alpha
Helix 2
AA2
A
525 562Right-handed alpha
Helix 3
AA3
A
569 601Right-handed alpha
Helix 4
AA4
A
605 627Right-handed alpha
Helix 5
AA5
B
489 513Right-handed alpha
Helix 6
AA6
B
525 562Right-handed alpha
Helix 7
AA7
B
569 601Right-handed alpha
Helix 8
AA8
B
605 627Right-handed alpha
Helix 9
AA9
C
490 515Right-handed alpha
Helix 10
AB1
C
525 562Right-handed alpha
Helix 11
AB2
C
569 601Right-handed alpha
Helix 12
AB3
C
605 627Right-handed alpha
Helix 13
AB4
D
489 513Right-handed alpha
Helix 14
AB5
D
525 561Right-handed alpha
Helix 15
AB6
D
569 601Right-handed alpha
Helix 16
AB7
D
605 627Right-handed alpha
Helix 17
AB8
E
489 513Right-handed alpha
Helix 18
AB9
E
525 562Right-handed alpha
Helix 19
AC1
E
569 601Right-handed alpha
Helix 20
AC2
E
605 627Right-handed alpha
Helix 21
AC3
F
489 513Right-handed alpha
Helix 22
AC4
F
525 562Right-handed alpha
Helix 23
AC5
F
569 601Right-handed alpha
Helix 24
AC6
F
605 627Right-handed alpha
Helix 25
AC7
G
5 25Right-handed alpha
Helix 26
AC8
H
4 24Right-handed alpha
Helix 27
AC9
I
5 25Right-handed alpha
Helix 28
AD1
J
0 24Right-handed alpha
Helix 29
AD2
K
0 25Right-handed alpha
Helix 30
AD3
L
5 25Right-handed alpha
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There are no sheets in PDB entry 5NL1
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