Analysis of interatomic Contacts of Structural Units in PDB entry:
5NL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NL6 entry

There are 2 chains in PDB entry 5NL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 243ALA 477
B
 LEU 248GLU 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5NL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
243 279Right-handed alpha
Helix 2
AA2
A
284 301Right-handed alpha
Helix 3
AA3
A
301 327Right-handed alpha
Helix 4
AA4
A
339 395Right-handed alpha
Helix 5
AA5
A
402 419Right-handed alpha
Helix 6
AA6
A
420 422Right-handed 310
Helix 7
AA7
A
423 437Right-handed alpha
Helix 8
AA8
A
448 476Right-handed alpha
Helix 9
AA9
B
249 279Right-handed alpha
Helix 10
AB1
B
284 301Right-handed alpha
Helix 11
AB2
B
301 327Right-handed alpha
Helix 12
AB3
B
339 395Right-handed alpha
Helix 13
AB4
B
402 419Right-handed alpha
Helix 14
AB5
B
420 422Right-handed 310
Helix 15
AB6
B
423 437Right-handed alpha
Helix 16
AB7
B
448 475Right-handed alpha
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There are no sheets in PDB entry 5NL6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il