Analysis of interatomic Contacts of Structural Units in PDB entry:
5NL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NL7 entry

There are 2 chains in PDB entry 5NL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASN 231
B
 ALA 2ASN 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5NL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 27Right-handed alpha
Helix 2
AA2
A
28 30Right-handed 310
Helix 3
AA3
A
35 40Right-handed alpha
Helix 4
AA4
A
43 55Right-handed alpha
Helix 5
AA5
A
66 84Right-handed alpha
Helix 6
AA6
A
92 98Right-handed alpha
Helix 7
AA7
A
100 116Right-handed alpha
Helix 8
AA8
A
117 121Right-handed 310
Helix 9
AA9
A
126 139Right-handed alpha
Helix 10
AB1
A
150 154Right-handed 310
Helix 11
AB2
A
156 167Right-handed alpha
Helix 12
AB3
A
172 176Right-handed 310
Helix 13
AB4
A
179 195Right-handed alpha
Helix 14
AB5
A
202 209Right-handed alpha
Helix 15
AB6
A
213 228Right-handed alpha
Helix 16
AB7
B
3 28Right-handed alpha
Helix 17
AB8
B
43 55Right-handed alpha
Helix 18
AB9
B
66 83Right-handed alpha
Helix 19
AC1
B
92 98Right-handed alpha
Helix 20
AC2
B
100 116Right-handed alpha
Helix 21
AC3
B
117 121Right-handed 310
Helix 22
AC4
B
126 139Right-handed alpha
Helix 23
AC5
B
150 154Right-handed 310
Helix 24
AC6
B
156 167Right-handed alpha
Helix 25
AC7
B
168 171Right-handed 310
Helix 26
AC8
B
172 176Right-handed 310
Helix 27
AC9
B
179 195Right-handed alpha
Helix 28
AD1
B
202 208Right-handed alpha
Helix 29
AD2
B
213 228Right-handed alpha
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There are no sheets in PDB entry 5NL7
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il