Analysis of interatomic Contacts of Structural Units in PDB entry:
5NLB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NLB entry

There are 2 chains in PDB entry 5NLB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 51ARG 204
B
 ASP 26ASN 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5NLB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 73Right-handed alpha
Helix 2
AA2
A
96 104Right-handed alpha
Helix 3
AA3
A
104 111Right-handed alpha
Helix 4
AA4
A
129 143Right-handed alpha
Helix 5
AA5
A
151 163Right-handed alpha
Helix 6
AA6
A
164 173Right-handed alpha
Helix 7
AA7
A
183 195Right-handed alpha
Helix 8
AA8
A
198 203Right-handed alpha
Helix 9
AA9
B
27 46Right-handed alpha
Helix 10
AB1
B
53 67Right-handed alpha
Helix 11
AB2
B
69 88Right-handed alpha
Helix 12
AB3
B
88 95Right-handed alpha
Helix 13
AB4
B
100 123Right-handed alpha
Helix 14
AB5
B
123 134Right-handed alpha
Helix 15
AB6
B
138 151Right-handed alpha
Helix 16
AB7
B
155 174Right-handed alpha
Helix 17
AB8
B
179 193Right-handed alpha
Helix 18
AB9
B
198 205Right-handed alpha
Helix 19
AC1
B
205 227Right-handed alpha
Helix 20
AC2
B
229 251Right-handed alpha
Helix 21
AC3
B
253 255Right-handed 310
Helix 22
AC4
B
256 269Right-handed alpha
Helix 23
AC5
B
272 278Right-handed alpha
Helix 24
AC6
B
283 290Right-handed alpha
Helix 25
AC7
B
292 304Right-handed alpha
Helix 26
AC8
B
308 330Right-handed alpha
Helix 27
AC9
B
340 359Right-handed alpha
Helix 28
AD1
B
363 381Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5NLB.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
79 83anti-parallel
Strand 3
A
123 125parallel
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