Analysis of interatomic Contacts of Structural Units in PDB entry:
5NLX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NLX entry

There is 1 chain in PDB entry 5NLX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9ARG 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5NLX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 43Right-handed alpha
Helix 2
AA2
A
44 47Right-handed 310
Helix 3
AA3
A
48 67Right-handed alpha
Helix 4
AA4
A
67 77Right-handed alpha
Helix 5
AA5
A
82 117Right-handed alpha
Helix 6
AA6
A
120 125Right-handed alpha
Helix 7
AA7
A
126 146Right-handed alpha
Helix 8
AA8
A
147 151Right-handed 310
Helix 9
AA9
A
159 166Right-handed alpha
Helix 10
AB1
A
176 181Right-handed alpha
Helix 11
AB2
A
182 189Right-handed alpha
Helix 12
AB3
A
195 237Right-handed alpha
Helix 13
AB4
A
239 260Right-handed alpha
Helix 14
AB5
A
281 298Right-handed alpha
Helix 15
AB6
A
300 318Right-handed alpha
Helix 16
AB7
A
318 364Right-handed alpha
Helix 17
AB8
A
371 397Right-handed alpha
Helix 18
AB9
A
397 409Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5NLX.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
173 174anti-parallel
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