Analysis of interatomic Contacts of Structural Units in PDB entry:
5NNV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NNV entry

There are 4 chains in PDB entry 5NNV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 250LEU 924
B
 MSE 250LEU 924
C
 LYS 247THR 922
D
 LYS 247GLU 927
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5NNV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
259 281Right-handed alpha
Helix 2
AA2
A
281 365Right-handed alpha
Helix 3
AA3
A
809 826Right-handed alpha
Helix 4
AA4
A
827 837Right-handed alpha
Helix 5
AA5
A
839 847Right-handed alpha
Helix 6
AA6
A
850 858Right-handed alpha
Helix 7
AA7
A
864 922Right-handed alpha
Helix 8
AA8
B
252 277Right-handed alpha
Helix 9
AA9
B
278 363Right-handed alpha
Helix 10
AB1
B
809 813Right-handed alpha
Helix 11
AB2
B
813 848Right-handed alpha
Helix 12
AB3
B
850 858Right-handed alpha
Helix 13
AB4
B
864 901Right-handed alpha
Helix 14
AB5
B
901 924Right-handed alpha
Helix 15
AB6
C
247 252Right-handed 310
Helix 16
AB7
C
255 277Right-handed alpha
Helix 17
AB8
C
278 363Right-handed alpha
Helix 18
AB9
C
804 826Right-handed alpha
Helix 19
AC1
C
828 839Right-handed alpha
Helix 20
AC2
C
839 847Right-handed alpha
Helix 21
AC3
C
850 858Right-handed alpha
Helix 22
AC4
C
860 898Right-handed alpha
Helix 23
AC5
C
899 922Right-handed alpha
Helix 24
AC6
D
248 253Right-handed alpha
Helix 25
AC7
D
255 277Right-handed alpha
Helix 26
AC8
D
281 367Right-handed alpha
Helix 27
AC9
D
368 370Right-handed 310
Helix 28
AD1
D
804 847Right-handed alpha
Helix 29
AD2
D
850 859Right-handed alpha
Helix 30
AD3
D
864 922Right-handed alpha
Helix 31
AD4
D
922 927Right-handed alpha
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There are no sheets in PDB entry 5NNV
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