Analysis of interatomic Contacts of Structural Units in PDB entry:
5NO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NO5 entry

There are 2 chains in PDB entry 5NO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 22GLU 370
B
 ASN 22GLU 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5NO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 35Right-handed alpha
Helix 2
AA2
A
40 47Right-handed alpha
Helix 3
AA3
A
58 74Right-handed alpha
Helix 4
AA4
A
75 88Right-handed alpha
Helix 5
AA5
A
93 113Right-handed alpha
Helix 6
AA6
A
154 160Right-handed 310
Helix 7
AA7
A
161 168Right-handed alpha
Helix 8
AA8
A
188 192Right-handed 310
Helix 9
AA9
A
193 202Right-handed alpha
Helix 10
AB1
A
217 227Right-handed alpha
Helix 11
AB2
A
228 230Right-handed 310
Helix 12
AB3
A
244 249Right-handed alpha
Helix 13
AB4
A
249 256Right-handed alpha
Helix 14
AB5
A
257 269Right-handed alpha
Helix 15
AB6
A
274 279Right-handed alpha
Helix 16
AB7
A
280 283Right-handed 310
Helix 17
AB8
A
285 291Right-handed alpha
Helix 18
AB9
A
309 319Right-handed alpha
Helix 19
AC1
A
333 335Right-handed 310
Helix 20
AC2
A
336 353Right-handed alpha
Helix 21
AC3
A
355 370Right-handed alpha
Helix 22
AC4
B
23 35Right-handed alpha
Helix 23
AC5
B
40 47Right-handed alpha
Helix 24
AC6
B
58 73Right-handed alpha
Helix 25
AC7
B
75 88Right-handed alpha
Helix 26
AC8
B
93 113Right-handed alpha
Helix 27
AC9
B
154 160Right-handed 310
Helix 28
AD1
B
161 168Right-handed alpha
Helix 29
AD2
B
188 192Right-handed 310
Helix 30
AD3
B
193 202Right-handed alpha
Helix 31
AD4
B
217 227Right-handed alpha
Helix 32
AD5
B
228 230Right-handed 310
Helix 33
AD6
B
244 249Right-handed alpha
Helix 34
AD7
B
249 256Right-handed alpha
Helix 35
AD8
B
257 269Right-handed alpha
Helix 36
AD9
B
274 279Right-handed alpha
Helix 37
AE1
B
280 283Right-handed 310
Helix 38
AE2
B
285 291Right-handed alpha
Helix 39
AE3
B
309 319Right-handed alpha
Helix 40
AE4
B
333 335Right-handed 310
Helix 41
AE5
B
336 352Right-handed alpha
Helix 42
AE6
B
355 370Right-handed alpha
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There are 2 sheets in PDB entry 5NO5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 124first strand
Strand 2
A
127 134anti-parallel
Strand 3
A
171 175anti-parallel
Strand 4
A
143 148parallel
Strand 5
A
207 215parallel
Strand 6
A
233 239parallel
Strand 7
A
296 301parallel
Strand 8
A
322 327parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 124first strand
Strand 2
B
127 134anti-parallel
Strand 3
B
171 175anti-parallel
Strand 4
B
143 148parallel
Strand 5
B
207 215parallel
Strand 6
B
233 239parallel
Strand 7
B
296 301parallel
Strand 8
B
322 327parallel
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