Analysis of interatomic Contacts of Structural Units in PDB entry:
5NQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NQS entry

There are 2 chains in PDB entry 5NQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ASN 180
B
 GLY 2LEU 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 5NQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 20Right-handed alpha
Helix 2
AA2
A
21 33Right-handed alpha
Helix 3
AA3
A
37 47Right-handed alpha
Helix 4
AA4
A
49 58Right-handed alpha
Helix 5
AA5
A
66 87Right-handed alpha
Helix 6
AA6
A
89 100Right-handed alpha
Helix 7
AA7
A
101 105Right-handed 310
Helix 8
AA8
A
108 118Right-handed alpha
Helix 9
AA9
A
119 121Right-handed 310
Helix 10
AB1
A
123 127Right-handed 310
Helix 11
AB2
A
128 133Right-handed 310
Helix 12
AB3
A
135 153Right-handed alpha
Helix 13
AB4
A
169 179Right-handed alpha
Helix 14
AB5
B
3 20Right-handed alpha
Helix 15
AB6
B
21 33Right-handed alpha
Helix 16
AB7
B
37 47Right-handed alpha
Helix 17
AB8
B
49 58Right-handed alpha
Helix 18
AB9
B
66 87Right-handed alpha
Helix 19
AC1
B
89 100Right-handed alpha
Helix 20
AC2
B
101 107Right-handed 310
Helix 21
AC3
B
108 118Right-handed alpha
Helix 22
AC4
B
119 121Right-handed 310
Helix 23
AC5
B
123 131Right-handed 310
Helix 24
AC6
B
135 154Right-handed alpha
Helix 25
AC7
B
155 158Right-handed 310
Helix 26
AC8
B
169 179Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5NQS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il