Analysis of interatomic Contacts of Structural Units in PDB entry:
5NR1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NR1 entry

There is 1 chain in PDB entry 5NR1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3PHE 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5NR1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
69 81Right-handed alpha
Helix 5
AA5
A
90 106Right-handed alpha
Helix 6
AA6
A
106 112Right-handed alpha
Helix 7
AA7
A
112 120Right-handed alpha
Helix 8
AA8
A
120 126Right-handed alpha
Helix 9
AA9
A
132 155Right-handed alpha
Helix 10
AB1
A
166 182Right-handed alpha
Helix 11
AB2
A
186 189Right-handed 310
Helix 12
AB3
A
190 202Right-handed alpha
Helix 13
AB4
A
203 205Right-handed 310
Helix 14
AB5
A
206 212Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5NR1.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
4 9parallel
Strand 3
A
55 60anti-parallel
Strand 4
A
63 68anti-parallel
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