Analysis of interatomic Contacts of Structural Units in PDB entry:
5NS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NS7 entry

There are 2 chains in PDB entry 5NS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0SER 439
B
 HIS 0HIS 193
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5NS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
31 37Right-handed alpha
Helix 3
AA3
A
43 47Right-handed 310
Helix 4
AA4
A
54 70Right-handed alpha
Helix 5
AA5
A
79 84Right-handed alpha
Helix 6
AA6
A
92 109Right-handed alpha
Helix 7
AA7
A
123 128Right-handed alpha
Helix 8
AA8
A
129 134Right-handed 310
Helix 9
AA9
A
135 153Right-handed alpha
Helix 10
AB1
A
164 174Right-handed alpha
Helix 11
AB2
A
184 210Right-handed alpha
Helix 12
AB3
A
230 245Right-handed alpha
Helix 13
AB4
A
245 255Right-handed alpha
Helix 14
AB5
A
258 266Right-handed alpha
Helix 15
AB6
A
274 280Right-handed alpha
Helix 16
AB7
A
326 341Right-handed alpha
Helix 17
AB8
A
365 384Right-handed alpha
Helix 18
AB9
A
402 409Right-handed 310
Helix 19
AC1
A
426 439Right-handed alpha
Helix 20
AC2
B
15 20Right-handed alpha
Helix 21
AC3
B
31 37Right-handed alpha
Helix 22
AC4
B
43 47Right-handed 310
Helix 23
AC5
B
54 70Right-handed alpha
Helix 24
AC6
B
79 84Right-handed alpha
Helix 25
AC7
B
92 109Right-handed alpha
Helix 26
AC8
B
123 128Right-handed alpha
Helix 27
AC9
B
129 134Right-handed 310
Helix 28
AD1
B
135 153Right-handed alpha
Helix 29
AD2
B
164 174Right-handed alpha
Helix 30
AD3
B
184 210Right-handed alpha
Helix 31
AD4
B
230 245Right-handed alpha
Helix 32
AD5
B
245 255Right-handed alpha
Helix 33
AD6
B
258 266Right-handed alpha
Helix 34
AD7
B
274 280Right-handed alpha
Helix 35
AD8
B
326 340Right-handed alpha
Helix 36
AD9
B
365 385Right-handed alpha
Helix 37
AE1
B
402 409Right-handed 310
Helix 38
AE2
B
426 439Right-handed alpha
Helix 39
AE3
C
15 20Right-handed alpha
Helix 40
AE4
C
31 37Right-handed alpha
Helix 41
AE5
C
43 47Right-handed 310
Helix 42
AE6
C
54 70Right-handed alpha
Helix 43
AE7
C
79 84Right-handed alpha
Helix 44
AE8
C
92 109Right-handed alpha
Helix 45
AE9
C
123 128Right-handed alpha
Helix 46
AF1
C
129 134Right-handed 310
Helix 47
AF2
C
135 153Right-handed alpha
Helix 48
AF3
C
164 174Right-handed alpha
Helix 49
AF4
C
184 210Right-handed alpha
Helix 50
AF5
C
230 245Right-handed alpha
Helix 51
AF6
C
245 255Right-handed alpha
Helix 52
AF7
C
258 266Right-handed alpha
Helix 53
AF8
C
274 280Right-handed alpha
Helix 54
AF9
C
326 341Right-handed alpha
Helix 55
AG1
C
365 385Right-handed alpha
Helix 56
AG2
C
402 409Right-handed 310
Helix 57
AG3
C
426 439Right-handed alpha
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There are 10 sheets in PDB entry 5NS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
73 77parallel
Strand 3
A
112 118parallel
Strand 4
A
158 163parallel
Strand 5
A
214 218parallel
Strand 6
A
285 288parallel
Strand 7
A
345 347parallel
Strand 8
A
389 395parallel
Strand 9
A
9 13parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
294 298parallel
Strand 3
A
307 309anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 416first strand
Strand 2
A
423 425anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
73 77parallel
Strand 3
B
112 118parallel
Strand 4
B
158 163parallel
Strand 5
B
214 220parallel
Strand 6
B
285 289parallel
Strand 7
B
345 349parallel
Strand 8
B
389 395parallel
Strand 9
B
9 13parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
294 298parallel
Strand 3
B
307 310anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 359first strand
Strand 2
B
362 363anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
414 416first strand
Strand 2
B
423 425anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 13first strand
Strand 2
C
73 77parallel
Strand 3
C
112 118parallel
Strand 4
C
158 163parallel
Strand 5
C
214 220parallel
Strand 6
C
285 289parallel
Strand 7
C
345 349parallel
Strand 8
C
389 395parallel
Strand 9
C
9 13parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 226first strand
Strand 2
C
294 298parallel
Strand 3
C
307 310anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
414 416first strand
Strand 2
C
423 425anti-parallel
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