Analysis of interatomic Contacts of Structural Units in PDB entry:
5NW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NW5 entry

There are 4 chains in PDB entry 5NW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 185GLN 1272
B
 GLU 185GLN 1272
C
 A 1 A 30
D
 T 1 T 30
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are164 helices in PDB entry 5NW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
210 212Right-handed 310
Helix 2
AA2
A
213 224Right-handed alpha
Helix 3
AA3
A
234 246Right-handed alpha
Helix 4
AA4
A
250 252Right-handed 310
Helix 5
AA5
A
253 286Right-handed alpha
Helix 6
AA6
A
294 313Right-handed alpha
Helix 7
AA7
A
314 322Right-handed alpha
Helix 8
AA8
A
324 332Right-handed alpha
Helix 9
AA9
A
332 339Right-handed alpha
Helix 10
AB1
A
348 362Right-handed alpha
Helix 11
AB2
A
364 369Right-handed alpha
Helix 12
AB3
A
370 379Right-handed alpha
Helix 13
AB4
A
389 407Right-handed alpha
Helix 14
AB5
A
407 414Right-handed alpha
Helix 15
AB6
A
414 423Right-handed alpha
Helix 16
AB7
A
423 429Right-handed alpha
Helix 17
AB8
A
435 454Right-handed alpha
Helix 18
AB9
A
461 468Right-handed alpha
Helix 19
AC1
A
471 476Right-handed alpha
Helix 20
AC2
A
477 482Right-handed alpha
Helix 21
AC3
A
488 492Right-handed 310
Helix 22
AC4
A
498 513Right-handed alpha
Helix 23
AC5
A
516 533Right-handed alpha
Helix 24
AC6
A
536 542Right-handed 310
Helix 25
AC7
A
543 558Right-handed alpha
Helix 26
AC8
A
561 571Right-handed alpha
Helix 27
AC9
A
572 582Right-handed alpha
Helix 28
AD1
A
587 598Right-handed alpha
Helix 29
AD2
A
599 606Right-handed alpha
Helix 30
AD3
A
607 609Right-handed 310
Helix 31
AD4
A
611 631Right-handed alpha
Helix 32
AD5
A
638 644Right-handed alpha
Helix 33
AD6
A
648 654Right-handed alpha
Helix 34
AD7
A
656 660Right-handed 310
Helix 35
AD8
A
662 678Right-handed alpha
Helix 36
AD9
A
695 701Right-handed 310
Helix 37
AE1
A
706 710Right-handed 310
Helix 38
AE2
A
714 721Right-handed alpha
Helix 39
AE3
A
721 736Right-handed alpha
Helix 40
AE4
A
739 753Right-handed alpha
Helix 41
AE5
A
755 759Right-handed 310
Helix 42
AE6
A
760 778Right-handed alpha
Helix 43
AE7
A
781 799Right-handed alpha
Helix 44
AE8
A
799 804Right-handed alpha
Helix 45
AE9
A
808 819Right-handed alpha
Helix 46
AF1
A
824 840Right-handed alpha
Helix 47
AF2
A
845 854Right-handed alpha
Helix 48
AF3
A
855 857Right-handed 310
Helix 49
AF4
A
858 870Right-handed alpha
Helix 50
AF5
A
879 893Right-handed alpha
Helix 51
AF6
A
895 907Right-handed alpha
Helix 52
AF7
A
915 920Right-handed alpha
Helix 53
AF8
A
921 924Right-handed 310
Helix 54
AF9
A
925 941Right-handed alpha
Helix 55
AG1
A
945 956Right-handed alpha
Helix 56
AG2
A
959 973Right-handed alpha
Helix 57
AG3
A
975 986Right-handed alpha
Helix 58
AG4
A
988 993Right-handed alpha
Helix 59
AG5
A
997 1004Right-handed alpha
Helix 60
AG6
A
1009 1014Right-handed alpha
Helix 61
AG7
A
1015 1020Right-handed 310
Helix 62
AG8
A
1023 1035Right-handed alpha
Helix 63
AG9
A
1037 1043Right-handed alpha
Helix 64
AH1
A
1044 1054Right-handed alpha
Helix 65
AH2
A
1058 1076Right-handed alpha
Helix 66
AH3
A
1079 1090Right-handed alpha
Helix 67
AH4
A
1094 1104Right-handed alpha
Helix 68
AH5
A
1106 1113Right-handed alpha
Helix 69
AH6
A
1114 1123Right-handed alpha
Helix 70
AH7
A
1126 1131Right-handed alpha
Helix 71
AH8
A
1132 1135Right-handed 310
Helix 72
AH9
A
1136 1141Right-handed alpha
Helix 73
AI1
A
1144 1159Right-handed alpha
Helix 74
AI2
A
1160 1165Right-handed 310
Helix 75
AI3
A
1169 1177Right-handed alpha
Helix 76
AI4
A
1178 1180Right-handed 310
Helix 77
AI5
A
1181 1199Right-handed alpha
Helix 78
AI6
A
1208 1217Right-handed alpha
Helix 79
AI7
A
1218 1220Right-handed 310
Helix 80
AI8
A
1229 1244Right-handed alpha
Helix 81
AI9
A
1254 1268Right-handed alpha
Helix 82
AJ1
B
210 212Right-handed 310
Helix 83
AJ2
B
213 224Right-handed alpha
Helix 84
AJ3
B
234 246Right-handed alpha
Helix 85
AJ4
B
250 252Right-handed 310
Helix 86
AJ5
B
253 286Right-handed alpha
Helix 87
AJ6
B
296 313Right-handed alpha
Helix 88
AJ7
B
314 322Right-handed alpha
Helix 89
AJ8
B
324 332Right-handed alpha
Helix 90
AJ9
B
332 339Right-handed alpha
Helix 91
AK1
B
348 362Right-handed alpha
Helix 92
AK2
B
364 369Right-handed alpha
Helix 93
AK3
B
370 379Right-handed alpha
Helix 94
AK4
B
389 407Right-handed alpha
Helix 95
AK5
B
407 414Right-handed alpha
Helix 96
AK6
B
414 423Right-handed alpha
Helix 97
AK7
B
423 429Right-handed alpha
Helix 98
AK8
B
430 434Right-handed 310
Helix 99
AK9
B
435 454Right-handed alpha
Helix 100
AL1
B
461 468Right-handed alpha
Helix 101
AL2
B
471 476Right-handed alpha
Helix 102
AL3
B
477 482Right-handed alpha
Helix 103
AL4
B
488 493Right-handed alpha
Helix 104
AL5
B
498 513Right-handed alpha
Helix 105
AL6
B
516 533Right-handed alpha
Helix 106
AL7
B
536 542Right-handed 310
Helix 107
AL8
B
543 558Right-handed alpha
Helix 108
AL9
B
561 566Right-handed alpha
Helix 109
AM1
B
566 571Right-handed alpha
Helix 110
AM2
B
572 582Right-handed alpha
Helix 111
AM3
B
587 598Right-handed alpha
Helix 112
AM4
B
599 606Right-handed alpha
Helix 113
AM5
B
607 609Right-handed 310
Helix 114
AM6
B
611 631Right-handed alpha
Helix 115
AM7
B
638 644Right-handed alpha
Helix 116
AM8
B
648 654Right-handed alpha
Helix 117
AM9
B
656 660Right-handed 310
Helix 118
AN1
B
662 678Right-handed alpha
Helix 119
AN2
B
695 701Right-handed 310
Helix 120
AN3
B
706 710Right-handed 310
Helix 121
AN4
B
714 721Right-handed alpha
Helix 122
AN5
B
721 736Right-handed alpha
Helix 123
AN6
B
739 753Right-handed alpha
Helix 124
AN7
B
755 759Right-handed 310
Helix 125
AN8
B
760 778Right-handed alpha
Helix 126
AN9
B
781 799Right-handed alpha
Helix 127
AO1
B
799 804Right-handed alpha
Helix 128
AO2
B
808 819Right-handed alpha
Helix 129
AO3
B
824 840Right-handed alpha
Helix 130
AO4
B
845 854Right-handed alpha
Helix 131
AO5
B
855 857Right-handed 310
Helix 132
AO6
B
858 870Right-handed alpha
Helix 133
AO7
B
879 893Right-handed alpha
Helix 134
AO8
B
895 905Right-handed alpha
Helix 135
AO9
B
906 909Right-handed 310
Helix 136
AP1
B
915 919Right-handed 310
Helix 137
AP2
B
920 924Right-handed 310
Helix 138
AP3
B
925 941Right-handed alpha
Helix 139
AP4
B
945 956Right-handed alpha
Helix 140
AP5
B
959 964Right-handed alpha
Helix 141
AP6
B
965 973Right-handed alpha
Helix 142
AP7
B
975 986Right-handed alpha
Helix 143
AP8
B
987 991Right-handed 310
Helix 144
AP9
B
999 1004Right-handed alpha
Helix 145
AQ1
B
1009 1020Right-handed 310
Helix 146
AQ2
B
1022 1035Right-handed alpha
Helix 147
AQ3
B
1037 1042Right-handed alpha
Helix 148
AQ4
B
1044 1053Right-handed alpha
Helix 149
AQ5
B
1058 1076Right-handed alpha
Helix 150
AQ6
B
1079 1090Right-handed alpha
Helix 151
AQ7
B
1094 1104Right-handed alpha
Helix 152
AQ8
B
1106 1111Right-handed alpha
Helix 153
AQ9
B
1114 1123Right-handed alpha
Helix 154
AR1
B
1126 1131Right-handed alpha
Helix 155
AR2
B
1132 1135Right-handed 310
Helix 156
AR3
B
1136 1141Right-handed alpha
Helix 157
AR4
B
1144 1159Right-handed alpha
Helix 158
AR5
B
1160 1165Right-handed 310
Helix 159
AR6
B
1169 1177Right-handed alpha
Helix 160
AR7
B
1178 1181Right-handed 310
Helix 161
AR8
B
1182 1201Right-handed alpha
Helix 162
AR9
B
1208 1217Right-handed alpha
Helix 163
AS1
B
1226 1244Right-handed alpha
Helix 164
AS2
B
1253 1269Right-handed alpha
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There are no sheets in PDB entry 5NW5
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