Analysis of interatomic Contacts of Structural Units in PDB entry:
5NWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NWS entry

There is 1 chain in PDB entry 5NWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 23PRO 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5NWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 35Right-handed alpha
Helix 2
AA2
A
35 47Right-handed alpha
Helix 3
AA3
A
65 75Right-handed alpha
Helix 4
AA4
A
108 113Right-handed alpha
Helix 5
AA5
A
114 118Right-handed 310
Helix 6
AA6
A
122 138Right-handed alpha
Helix 7
AA7
A
139 141Right-handed 310
Helix 8
AA8
A
142 157Right-handed alpha
Helix 9
AA9
A
158 161Right-handed 310
Helix 10
AB1
A
169 173Right-handed alpha
Helix 11
AB2
A
173 187Right-handed alpha
Helix 12
AB3
A
189 191Right-handed 310
Helix 13
AB4
A
192 206Right-handed alpha
Helix 14
AB5
A
207 232Right-handed alpha
Helix 15
AB6
A
236 244Right-handed alpha
Helix 16
AB7
A
253 286Right-handed alpha
Helix 17
AB8
A
286 296Right-handed alpha
Helix 18
AB9
A
299 312Right-handed alpha
Helix 19
AC1
A
342 348Right-handed alpha
Helix 20
AC2
A
377 381Right-handed 310
Helix 21
AC3
A
384 403Right-handed alpha
Helix 22
AC4
A
412 417Right-handed 310
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There are 3 sheets in PDB entry 5NWS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
59 63anti-parallel
Strand 3
A
338 341parallel
Strand 4
A
320 322anti-parallel
Strand 5
A
78 79anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
430 432anti-parallel
Strand 3
A
407 408anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
331 333anti-parallel
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