Analysis of interatomic Contacts of Structural Units in PDB entry:
5NZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5NZQ entry

There are 2 chains in PDB entry 5NZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 100ARG 294
A
 ASN 100ARG 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5NZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
102 120Right-handed alpha
Helix 2
AA2
B
120 130Right-handed alpha
Helix 3
AA3
B
154 166Right-handed alpha
Helix 4
AA4
B
179 185Right-handed alpha
Helix 5
AA5
B
192 200Right-handed alpha
Helix 6
AA6
B
218 225Right-handed alpha
Helix 7
AA7
B
241 252Right-handed alpha
Helix 8
AA8
B
270 275Right-handed alpha
Helix 9
AA9
B
288 293Right-handed alpha
Helix 10
AB1
A
102 120Right-handed alpha
Helix 11
AB2
A
120 130Right-handed alpha
Helix 12
AB3
A
154 166Right-handed alpha
Helix 13
AB4
A
179 185Right-handed alpha
Helix 14
AB5
A
192 197Right-handed alpha
Helix 15
AB6
A
198 200Right-handed 310
Helix 16
AB7
A
218 223Right-handed alpha
Helix 17
AB8
A
241 252Right-handed alpha
Helix 18
AB9
A
270 275Right-handed alpha
Helix 19
AC1
A
288 293Right-handed alpha
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There are 2 sheets in PDB entry 5NZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
170 174parallel
Strand 3
B
147 151parallel
Strand 4
B
202 205parallel
Strand 5
B
229 233parallel
Strand 6
B
254 259parallel
Strand 7
B
278 280parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
170 174parallel
Strand 3
A
147 151parallel
Strand 4
A
202 205parallel
Strand 5
A
229 233parallel
Strand 6
A
254 259parallel
Strand 7
A
278 280parallel
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