Analysis of interatomic Contacts of Structural Units in PDB entry:
5O01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O01 entry

There are 2 chains in PDB entry 5O01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2SER 255
B
 ASP 2SER 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 5O01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 26Right-handed alpha
Helix 2
AA2
A
29 47Right-handed alpha
Helix 3
AA3
A
49 67Right-handed alpha
Helix 4
AA4
A
71 90Right-handed alpha
Helix 5
AA5
A
91 109Right-handed alpha
Helix 6
AA6
A
114 131Right-handed alpha
Helix 7
AA7
A
133 152Right-handed alpha
Helix 8
AA8
A
156 173Right-handed alpha
Helix 9
AA9
A
175 192Right-handed alpha
Helix 10
AB1
A
199 217Right-handed alpha
Helix 11
AB2
A
219 237Right-handed alpha
Helix 12
AB3
B
3 26Right-handed alpha
Helix 13
AB4
B
29 47Right-handed alpha
Helix 14
AB5
B
49 66Right-handed alpha
Helix 15
AB6
B
71 90Right-handed alpha
Helix 16
AB7
B
91 109Right-handed alpha
Helix 17
AB8
B
110 113Right-handed 310
Helix 18
AB9
B
114 131Right-handed alpha
Helix 19
AC1
B
133 153Right-handed alpha
Helix 20
AC2
B
156 173Right-handed alpha
Helix 21
AC3
B
175 192Right-handed alpha
Helix 22
AC4
B
199 217Right-handed alpha
Helix 23
AC5
B
219 237Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5O01
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il