Analysis of interatomic Contacts of Structural Units in PDB entry:
5O1M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O1M entry

There are 2 chains in PDB entry 5O1M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 32ASP 402
B
 PRO 32ASP 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5O1M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 41Right-handed 310
Helix 2
AA2
A
50 54Right-handed 310
Helix 3
AA3
A
59 69Right-handed alpha
Helix 4
AA4
A
71 81Right-handed alpha
Helix 5
AA5
A
94 105Right-handed alpha
Helix 6
AA6
A
112 126Right-handed alpha
Helix 7
AA7
A
126 136Right-handed alpha
Helix 8
AA8
A
136 143Right-handed alpha
Helix 9
AA9
A
145 155Right-handed alpha
Helix 10
AB1
A
160 165Right-handed alpha
Helix 11
AB2
A
166 176Right-handed alpha
Helix 12
AB3
A
186 205Right-handed alpha
Helix 13
AB4
A
208 214Right-handed alpha
Helix 14
AB5
A
223 245Right-handed alpha
Helix 15
AB6
A
250 268Right-handed alpha
Helix 16
AB7
A
278 290Right-handed alpha
Helix 17
AB8
A
291 294Right-handed 310
Helix 18
AB9
A
297 314Right-handed alpha
Helix 19
AC1
A
319 332Right-handed alpha
Helix 20
AC2
A
332 340Right-handed alpha
Helix 21
AC3
A
344 363Right-handed alpha
Helix 22
AC4
A
372 390Right-handed alpha
Helix 23
AC5
B
37 41Right-handed 310
Helix 24
AC6
B
51 54Right-handed 310
Helix 25
AC7
B
59 69Right-handed alpha
Helix 26
AC8
B
71 81Right-handed alpha
Helix 27
AC9
B
94 105Right-handed alpha
Helix 28
AD1
B
112 126Right-handed alpha
Helix 29
AD2
B
126 136Right-handed alpha
Helix 30
AD3
B
136 143Right-handed alpha
Helix 31
AD4
B
145 155Right-handed alpha
Helix 32
AD5
B
160 165Right-handed alpha
Helix 33
AD6
B
166 176Right-handed alpha
Helix 34
AD7
B
186 205Right-handed alpha
Helix 35
AD8
B
208 215Right-handed alpha
Helix 36
AD9
B
223 245Right-handed alpha
Helix 37
AE1
B
250 268Right-handed alpha
Helix 38
AE2
B
278 290Right-handed alpha
Helix 39
AE3
B
291 294Right-handed 310
Helix 40
AE4
B
297 314Right-handed alpha
Helix 41
AE5
B
319 332Right-handed alpha
Helix 42
AE6
B
332 340Right-handed alpha
Helix 43
AE7
B
344 363Right-handed alpha
Helix 44
AE8
B
373 390Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5O1M.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
47 49anti-parallel
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