Analysis of interatomic Contacts of Structural Units in PDB entry:
5O1N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O1N entry

There is 1 chain in PDB entry 5O1N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 481PRO 926
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5O1N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
491 500Right-handed alpha
Helix 2
AA2
A
513 524Right-handed alpha
Helix 3
AA3
A
536 546Right-handed alpha
Helix 4
AA4
A
555 557Right-handed 310
Helix 5
AA5
A
558 569Right-handed alpha
Helix 6
AA6
A
580 585Right-handed alpha
Helix 7
AA7
A
586 594Right-handed alpha
Helix 8
AA8
A
606 622Right-handed alpha
Helix 9
AA9
A
639 642Right-handed 310
Helix 10
AB1
A
654 663Right-handed alpha
Helix 11
AB2
A
678 686Right-handed 310
Helix 12
AB3
A
707 713Right-handed alpha
Helix 13
AB4
A
729 740Right-handed alpha
Helix 14
AB5
A
759 769Right-handed alpha
Helix 15
AB6
A
774 786Right-handed alpha
Helix 16
AB7
A
790 801Right-handed alpha
Helix 17
AB8
A
813 826Right-handed alpha
Helix 18
AB9
A
868 888Right-handed alpha
Helix 19
AC1
A
900 911Right-handed alpha
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There are 3 sheets in PDB entry 5O1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
527 530first strand
Strand 2
A
506 511parallel
Strand 3
A
482 486parallel
Strand 4
A
549 552parallel
Strand 5
A
572 575parallel
Strand 6
A
596 598parallel
Strand 7
A
894 896parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 689first strand
Strand 2
A
697 701anti-parallel
Strand 3
A
719 727anti-parallel
Strand 4
A
625 637parallel
Strand 5
A
834 845anti-parallel
Strand 6
A
851 861anti-parallel
Strand 7
A
918 925anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 669first strand
Strand 2
A
672 676anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il