Analysis of interatomic Contacts of Structural Units in PDB entry:
5O2C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O2C entry

There is 1 chain in PDB entry 5O2C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 129GLU 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5O2C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
131 135Right-handed 310
Helix 2
AA2
A
184 198Right-handed alpha
Helix 3
AA3
A
199 201Right-handed 310
Helix 4
AA4
A
234 242Right-handed alpha
Helix 5
AA5
A
248 266Right-handed alpha
Helix 6
AA6
A
277 279Right-handed 310
Helix 7
AA7
A
297 302Right-handed 310
Helix 8
AA8
A
303 311Right-handed alpha
Helix 9
AA9
A
312 316Right-handed 310
Helix 10
AB1
A
317 322Right-handed 310
Helix 11
AB2
A
327 344Right-handed alpha
Helix 12
AB3
A
353 364Right-handed alpha
Helix 13
AB4
A
367 373Right-handed 310
Helix 14
AB5
A
375 386Right-handed alpha
Helix 15
AB6
A
389 393Right-handed 310
Helix 16
AB7
A
395 400Right-handed alpha
Helix 17
AB8
A
401 406Right-handed 310
Helix 18
AB9
A
434 438Right-handed 310
Helix 19
AC1
A
458 469Right-handed alpha
Helix 20
AC2
A
473 475Right-handed 310
Helix 21
AC3
A
476 495Right-handed alpha
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There are 3 sheets in PDB entry 5O2C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
146 154anti-parallel
Strand 3
A
159 166anti-parallel
Strand 4
A
172 178anti-parallel
Strand 5
A
220 228anti-parallel
Strand 6
A
209 217anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 283first strand
Strand 2
A
290 292anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 415first strand
Strand 2
A
425 432anti-parallel
Strand 3
A
447 453anti-parallel
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