Analysis of interatomic Contacts of Structural Units in PDB entry:
5O2D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O2D entry

There is 1 chain in PDB entry 5O2D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1002ALA 1190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5O2D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1044 1055Right-handed alpha
Helix 2
AA2
A
1056 1067Right-handed alpha
Helix 3
AA3
A
1096 1099Right-handed 310
Helix 4
AA4
A
1100 1122Right-handed alpha
Helix 5
AA5
A
1140 1159Right-handed alpha
Helix 6
AA6
A
1175 1190Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5O2D.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1006 1009first strand
Strand 2
A
1015 1019anti-parallel
Strand 3
A
1166 1170parallel
Strand 4
A
1126 1130parallel
Strand 5
A
1030 1034parallel
Strand 6
A
1088 1092parallel
Strand 7
A
1076 1080anti-parallel
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