Analysis of interatomic Contacts of Structural Units in PDB entry:
5O30

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5O30 entry

There are 3 chains in PDB entry 5O30 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 6	ALA 262
B	GLU 5	ALA 262
C	ASN 6	GLY 166

There are120 helices in PDB entry 5O30. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	30	Right-handed alpha
Helix 2	AA2	A	51	62	Right-handed alpha
Helix 3	AA3	A	76	92	Right-handed alpha
Helix 4	AA4	A	108	112	Right-handed 310
Helix 5	AA5	A	113	125	Right-handed alpha
Helix 6	AA6	A	125	143	Right-handed alpha
Helix 7	AA7	A	152	157	Right-handed 310
Helix 8	AA8	A	162	183	Right-handed alpha
Helix 9	AA9	A	184	186	Right-handed 310
Helix 10	AB1	A	200	207	Right-handed alpha
Helix 11	AB2	A	212	222	Right-handed alpha
Helix 12	AB3	A	230	241	Right-handed alpha
Helix 13	AB4	B	19	30	Right-handed alpha
Helix 14	AB5	B	51	62	Right-handed alpha
Helix 15	AB6	B	76	92	Right-handed alpha
Helix 16	AB7	B	108	112	Right-handed 310
Helix 17	AB8	B	113	125	Right-handed alpha
Helix 18	AB9	B	125	143	Right-handed alpha
Helix 19	AC1	B	152	157	Right-handed 310
Helix 20	AC2	B	162	183	Right-handed alpha
Helix 21	AC3	B	184	186	Right-handed 310
Helix 22	AC4	B	200	207	Right-handed alpha
Helix 23	AC5	B	212	222	Right-handed alpha
Helix 24	AC6	B	230	241	Right-handed alpha
Helix 25	AC7	C	19	30	Right-handed alpha
Helix 26	AC8	C	51	62	Right-handed alpha
Helix 27	AC9	C	76	92	Right-handed alpha
Helix 28	AD1	C	108	112	Right-handed 310
Helix 29	AD2	C	113	125	Right-handed alpha
Helix 30	AD3	C	125	143	Right-handed alpha
Helix 31	AD4	C	152	157	Right-handed 310
Helix 32	AD5	C	162	183	Right-handed alpha
Helix 33	AD6	C	184	186	Right-handed 310
Helix 34	AD7	C	200	207	Right-handed alpha
Helix 35	AD8	C	212	222	Right-handed alpha
Helix 36	AD9	C	230	241	Right-handed alpha
Helix 37	AE1	D	19	30	Right-handed alpha
Helix 38	AE2	D	51	62	Right-handed alpha
Helix 39	AE3	D	76	92	Right-handed alpha
Helix 40	AE4	D	108	112	Right-handed 310
Helix 41	AE5	D	113	125	Right-handed alpha
Helix 42	AE6	D	125	143	Right-handed alpha
Helix 43	AE7	D	152	157	Right-handed 310
Helix 44	AE8	D	162	183	Right-handed alpha
Helix 45	AE9	D	184	186	Right-handed 310
Helix 46	AF1	D	200	207	Right-handed alpha
Helix 47	AF2	D	212	221	Right-handed alpha
Helix 48	AF3	D	230	241	Right-handed alpha
Helix 49	AF4	E	19	30	Right-handed alpha
Helix 50	AF5	E	51	62	Right-handed alpha
Helix 51	AF6	E	76	92	Right-handed alpha
Helix 52	AF7	E	108	112	Right-handed 310
Helix 53	AF8	E	113	125	Right-handed alpha
Helix 54	AF9	E	125	143	Right-handed alpha
Helix 55	AG1	E	152	157	Right-handed 310
Helix 56	AG2	E	162	183	Right-handed alpha
Helix 57	AG3	E	184	186	Right-handed 310
Helix 58	AG4	E	200	207	Right-handed alpha
Helix 59	AG5	E	212	222	Right-handed alpha
Helix 60	AG6	E	230	241	Right-handed alpha
Helix 61	AG7	F	19	30	Right-handed alpha
Helix 62	AG8	F	51	62	Right-handed alpha
Helix 63	AG9	F	76	92	Right-handed alpha
Helix 64	AH1	F	108	112	Right-handed 310
Helix 65	AH2	F	113	125	Right-handed alpha
Helix 66	AH3	F	125	143	Right-handed alpha
Helix 67	AH4	F	152	157	Right-handed 310
Helix 68	AH5	F	162	183	Right-handed alpha
Helix 69	AH6	F	184	186	Right-handed 310
Helix 70	AH7	F	200	207	Right-handed alpha
Helix 71	AH8	F	212	222	Right-handed alpha
Helix 72	AH9	F	230	241	Right-handed alpha
Helix 73	AI1	G	19	30	Right-handed alpha
Helix 74	AI2	G	51	62	Right-handed alpha
Helix 75	AI3	G	76	91	Right-handed alpha
Helix 76	AI4	G	108	112	Right-handed 310
Helix 77	AI5	G	113	125	Right-handed alpha
Helix 78	AI6	G	125	143	Right-handed alpha
Helix 79	AI7	G	152	157	Right-handed 310
Helix 80	AI8	G	162	183	Right-handed alpha
Helix 81	AI9	G	184	186	Right-handed 310
Helix 82	AJ1	G	200	207	Right-handed alpha
Helix 83	AJ2	G	212	221	Right-handed alpha
Helix 84	AJ3	G	230	241	Right-handed alpha
Helix 85	AJ4	H	19	30	Right-handed alpha
Helix 86	AJ5	H	51	62	Right-handed alpha
Helix 87	AJ6	H	76	92	Right-handed alpha
Helix 88	AJ7	H	108	112	Right-handed 310
Helix 89	AJ8	H	113	125	Right-handed alpha
Helix 90	AJ9	H	125	143	Right-handed alpha
Helix 91	AK1	H	152	157	Right-handed 310
Helix 92	AK2	H	162	183	Right-handed alpha
Helix 93	AK3	H	184	186	Right-handed 310
Helix 94	AK4	H	200	207	Right-handed alpha
Helix 95	AK5	H	212	222	Right-handed alpha
Helix 96	AK6	H	230	241	Right-handed alpha
Helix 97	AK7	I	19	30	Right-handed alpha
Helix 98	AK8	I	51	62	Right-handed alpha
Helix 99	AK9	I	76	92	Right-handed alpha
Helix 100	AL1	I	108	112	Right-handed 310
Helix 101	AL2	I	113	125	Right-handed alpha
Helix 102	AL3	I	125	143	Right-handed alpha
Helix 103	AL4	I	152	157	Right-handed 310
Helix 104	AL5	I	162	183	Right-handed alpha
Helix 105	AL6	I	184	186	Right-handed 310
Helix 106	AL7	I	200	207	Right-handed alpha
Helix 107	AL8	I	212	222	Right-handed alpha
Helix 108	AL9	I	230	241	Right-handed alpha
Helix 109	AM1	J	19	30	Right-handed alpha
Helix 110	AM2	J	51	62	Right-handed alpha
Helix 111	AM3	J	76	92	Right-handed alpha
Helix 112	AM4	J	108	112	Right-handed 310
Helix 113	AM5	J	113	125	Right-handed alpha
Helix 114	AM6	J	125	143	Right-handed alpha
Helix 115	AM7	J	152	157	Right-handed 310
Helix 116	AM8	J	162	183	Right-handed alpha
Helix 117	AM9	J	184	186	Right-handed 310
Helix 118	AN1	J	200	207	Right-handed alpha
Helix 119	AN2	J	212	222	Right-handed alpha
Helix 120	AN3	J	230	241	Right-handed alpha

There are 10 sheets in PDB entry 5O30. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	69	first strand
Strand 2	A	33	37	parallel
Strand 3	A	9	12	parallel
Strand 4	A	96	100	parallel
Strand 5	A	145	150	parallel
Strand 6	A	188	195	parallel
Strand 7	A	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	69	first strand
Strand 2	B	33	37	parallel
Strand 3	B	9	12	parallel
Strand 4	B	96	100	parallel
Strand 5	B	145	150	parallel
Strand 6	B	188	195	parallel
Strand 7	B	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	69	first strand
Strand 2	C	33	37	parallel
Strand 3	C	9	12	parallel
Strand 4	C	96	100	parallel
Strand 5	C	145	150	parallel
Strand 6	C	188	195	parallel
Strand 7	C	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	69	first strand
Strand 2	D	33	37	parallel
Strand 3	D	9	12	parallel
Strand 4	D	96	100	parallel
Strand 5	D	145	150	parallel
Strand 6	D	188	195	parallel
Strand 7	D	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	69	first strand
Strand 2	E	33	37	parallel
Strand 3	E	9	12	parallel
Strand 4	E	96	100	parallel
Strand 5	E	145	150	parallel
Strand 6	E	188	195	parallel
Strand 7	E	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	69	first strand
Strand 2	F	33	37	parallel
Strand 3	F	9	12	parallel
Strand 4	F	96	100	parallel
Strand 5	F	145	150	parallel
Strand 6	F	188	195	parallel
Strand 7	F	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	69	first strand
Strand 2	G	33	37	parallel
Strand 3	G	9	12	parallel
Strand 4	G	96	100	parallel
Strand 5	G	145	150	parallel
Strand 6	G	188	195	parallel
Strand 7	G	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	69	first strand
Strand 2	H	33	37	parallel
Strand 3	H	9	12	parallel
Strand 4	H	96	100	parallel
Strand 5	H	145	150	parallel
Strand 6	H	188	195	parallel
Strand 7	H	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	69	first strand
Strand 2	I	33	37	parallel
Strand 3	I	9	12	parallel
Strand 4	I	96	100	parallel
Strand 5	I	145	150	parallel
Strand 6	I	188	195	parallel
Strand 7	I	253	256	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	69	first strand
Strand 2	J	33	37	parallel
Strand 3	J	9	12	parallel
Strand 4	J	96	100	parallel
Strand 5	J	145	150	parallel
Strand 6	J	188	195	parallel
Strand 7	J	253	256	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5O30

Analysis of interatomic Contacts of Structural Units in PDB entry:
5O30