Analysis of interatomic Contacts of Structural Units in PDB entry:
5O5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O5X entry

There are 2 chains in PDB entry 5O5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 454
B
 GLU 3LYS 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 5O5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 27Right-handed alpha
Helix 2
AA2
A
28 30Right-handed 310
Helix 3
AA3
A
48 60Right-handed alpha
Helix 4
AA4
A
60 70Right-handed alpha
Helix 5
AA5
A
77 92Right-handed alpha
Helix 6
AA6
A
101 112Right-handed alpha
Helix 7
AA7
A
120 130Right-handed alpha
Helix 8
AA8
A
145 150Right-handed alpha
Helix 9
AA9
A
171 175Right-handed 310
Helix 10
AB1
A
213 217Right-handed 310
Helix 11
AB2
A
220 226Right-handed alpha
Helix 12
AB3
A
226 232Right-handed alpha
Helix 13
AB4
A
241 245Right-handed 310
Helix 14
AB5
A
254 272Right-handed alpha
Helix 15
AB6
A
285 296Right-handed alpha
Helix 16
AB7
A
297 299Right-handed 310
Helix 17
AB8
A
306 317Right-handed alpha
Helix 18
AB9
A
318 327Right-handed alpha
Helix 19
AC1
A
329 345Right-handed alpha
Helix 20
AC2
A
384 399Right-handed alpha
Helix 21
AC3
A
403 422Right-handed alpha
Helix 22
AC4
A
426 436Right-handed 310
Helix 23
AC5
A
439 453Right-handed alpha
Helix 24
AC6
B
4 27Right-handed alpha
Helix 25
AC7
B
28 30Right-handed 310
Helix 26
AC8
B
48 59Right-handed alpha
Helix 27
AC9
B
60 70Right-handed alpha
Helix 28
AD1
B
77 92Right-handed alpha
Helix 29
AD2
B
101 112Right-handed alpha
Helix 30
AD3
B
120 130Right-handed alpha
Helix 31
AD4
B
145 150Right-handed alpha
Helix 32
AD5
B
171 176Right-handed 310
Helix 33
AD6
B
213 217Right-handed 310
Helix 34
AD7
B
220 226Right-handed alpha
Helix 35
AD8
B
226 232Right-handed alpha
Helix 36
AD9
B
241 245Right-handed 310
Helix 37
AE1
B
254 272Right-handed alpha
Helix 38
AE2
B
285 296Right-handed alpha
Helix 39
AE3
B
297 299Right-handed 310
Helix 40
AE4
B
305 317Right-handed alpha
Helix 41
AE5
B
318 327Right-handed alpha
Helix 42
AE6
B
329 345Right-handed alpha
Helix 43
AE7
B
384 398Right-handed alpha
Helix 44
AE8
B
403 422Right-handed alpha
Helix 45
AE9
B
426 436Right-handed 310
Helix 46
AF1
B
439 451Right-handed alpha
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There are 6 sheets in PDB entry 5O5X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 170first strand
Strand 2
A
157 163anti-parallel
Strand 3
A
137 139parallel
Strand 4
A
33 36parallel
Strand 5
A
236 239parallel
Strand 6
A
275 279parallel
Strand 7
A
301 305parallel
Strand 8
A
348 353parallel
Strand 9
A
356 362anti-parallel
Strand 10
A
366 372anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 98first strand
Strand 2
A
204 210parallel
Strand 3
A
183 189anti-parallel
Strand 4
A
40 46parallel
Strand 5
A
115 119anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
198 199anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 170first strand
Strand 2
B
157 163anti-parallel
Strand 3
B
137 139parallel
Strand 4
B
33 36parallel
Strand 5
B
236 239parallel
Strand 6
B
275 279parallel
Strand 7
B
301 304parallel
Strand 8
B
348 353parallel
Strand 9
B
356 361anti-parallel
Strand 10
B
367 372anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
204 210parallel
Strand 3
B
183 189anti-parallel
Strand 4
B
40 46parallel
Strand 5
B
115 119anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
198 199anti-parallel
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