Analysis of interatomic Contacts of Structural Units in PDB entry:
5O64

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5O64 entry

There are 4 chains in PDB entry 5O64 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	CYS 1	LYS 332
H	TYR 2	LEU 258
L	ALA 1	SER 273
M	ALA 1	LYS 323

There are 64 helices in PDB entry 5O64. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	24	37	Right-handed alpha
Helix 2	AA2	C	51	55	Right-handed 310
Helix 3	AA3	C	66	82	Right-handed alpha
Helix 4	AA4	C	86	90	Right-handed 310
Helix 5	AA5	C	101	121	Right-handed alpha
Helix 6	AA6	C	121	126	Right-handed alpha
Helix 7	AA7	C	131	137	Right-handed alpha
Helix 8	AA8	C	168	170	Right-handed 310
Helix 9	AA9	C	171	178	Right-handed alpha
Helix 10	AB1	C	188	194	Right-handed alpha
Helix 11	AB2	C	216	220	Right-handed 310
Helix 12	AB3	C	223	241	Right-handed alpha
Helix 13	AB4	C	243	247	Right-handed 310
Helix 14	AB5	C	249	253	Right-handed 310
Helix 15	AB6	C	256	260	Right-handed 310
Helix 16	AB7	C	261	281	Right-handed alpha
Helix 17	AB8	C	282	288	Right-handed 310
Helix 18	AB9	C	304	310	Right-handed alpha
Helix 19	AC1	C	314	319	Right-handed 310
Helix 20	AC2	C	325	329	Right-handed 310
Helix 21	AC3	H	12	31	Right-handed alpha
Helix 22	AC4	H	31	36	Right-handed alpha
Helix 23	AC5	H	55	61	Right-handed alpha
Helix 24	AC6	H	106	111	Right-handed alpha
Helix 25	AC7	H	112	116	Right-handed 310
Helix 26	AC8	H	199	201	Right-handed 310
Helix 27	AC9	H	215	221	Right-handed 310
Helix 28	AD1	H	231	249	Right-handed alpha
Helix 29	AD2	H	250	254	Right-handed 310
Helix 30	AD3	L	6	10	Right-handed 310
Helix 31	AD4	L	18	22	Right-handed 310
Helix 32	AD5	L	32	55	Right-handed alpha
Helix 33	AD6	L	70	74	Right-handed 310
Helix 34	AD7	L	83	112	Right-handed alpha
Helix 35	AD8	L	115	133	Right-handed alpha
Helix 36	AD9	L	133	139	Right-handed alpha
Helix 37	AE1	L	141	145	Right-handed 310
Helix 38	AE2	L	151	164	Right-handed alpha
Helix 39	AE3	L	165	169	Right-handed 310
Helix 40	AE4	L	170	199	Right-handed alpha
Helix 41	AE5	L	208	221	Right-handed alpha
Helix 42	AE6	L	225	251	Right-handed alpha
Helix 43	AE7	L	258	263	Right-handed alpha
Helix 44	AE8	L	263	268	Right-handed alpha
Helix 45	AE9	L	269	273	Right-handed 310
Helix 46	AF1	M	2	6	Right-handed 310
Helix 47	AF2	M	37	41	Right-handed 310
Helix 48	AF3	M	52	77	Right-handed alpha
Helix 49	AF4	M	80	87	Right-handed alpha
Helix 50	AF5	M	88	91	Right-handed 310
Helix 51	AF6	M	106	109	Right-handed 310
Helix 52	AF7	M	110	139	Right-handed alpha
Helix 53	AF8	M	142	160	Right-handed alpha
Helix 54	AF9	M	160	167	Right-handed alpha
Helix 55	AG1	M	168	172	Right-handed 310
Helix 56	AG2	M	176	191	Right-handed alpha
Helix 57	AG3	M	193	196	Right-handed 310
Helix 58	AG4	M	197	224	Right-handed alpha
Helix 59	AG5	M	225	228	Right-handed 310
Helix 60	AG6	M	231	238	Right-handed alpha
Helix 61	AG7	M	240	255	Right-handed alpha
Helix 62	AG8	M	261	285	Right-handed alpha
Helix 63	AG9	M	291	299	Right-handed alpha
Helix 64	AH1	M	314	318	Right-handed 310

There are 7 sheets in PDB entry 5O64. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	C	22	23	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	6	first strand
Strand 2	H	10	11	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	68	first strand
Strand 2	H	76	78	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	92	first strand
Strand 2	H	101	103	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	136	first strand
Strand 2	H	164	174	anti-parallel
Strand 3	H	179	187	anti-parallel
Strand 4	H	193	197	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	134	136	first strand
Strand 2	H	164	174	anti-parallel
Strand 3	H	156	158	anti-parallel
Strand 4	H	208	209	parallel
Strand 5	H	202	203	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	24	26	first strand
Strand 2	L	29	31	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5O64

Analysis of interatomic Contacts of Structural Units in PDB entry:
5O64