Analysis of interatomic Contacts of Structural Units in PDB entry:
5O74

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5O74 entry

There are 6 chains in PDB entry 5O74 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 342	TYR 532
B	GLU 4	TYR 78
B	GLY 80	MET 173
C	THR 341	TYR 532
D	GLU 4	TYR 78
D	GLY 80	VAL 87

There are 97 helices in PDB entry 5O74. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	342	362	Right-handed alpha
Helix 2	AA2	A	364	383	Right-handed alpha
Helix 3	AA3	A	385	390	Right-handed alpha
Helix 4	AA4	A	391	394	Right-handed 310
Helix 5	AA5	A	399	420	Right-handed alpha
Helix 6	AA6	A	427	448	Right-handed alpha
Helix 7	AA7	A	457	461	Right-handed 310
Helix 8	AA8	A	463	479	Right-handed alpha
Helix 9	AA9	A	490	507	Right-handed alpha
Helix 10	AB1	A	511	521	Right-handed alpha
Helix 11	AB2	B	20	25	Right-handed alpha
Helix 12	AB3	B	26	28	Right-handed 310
Helix 13	AB4	B	35	42	Right-handed alpha
Helix 14	AB5	B	66	70	Right-handed 310
Helix 15	AB6	B	74	78	Right-handed 310
Helix 16	AB7	B	92	110	Right-handed alpha
Helix 17	AB8	B	132	143	Right-handed alpha
Helix 18	AB9	B	157	173	Right-handed alpha
Helix 19	AC1	C	342	362	Right-handed alpha
Helix 20	AC2	C	364	383	Right-handed alpha
Helix 21	AC3	C	385	390	Right-handed alpha
Helix 22	AC4	C	391	394	Right-handed 310
Helix 23	AC5	C	399	420	Right-handed alpha
Helix 24	AC6	C	427	448	Right-handed alpha
Helix 25	AC7	C	463	479	Right-handed alpha
Helix 26	AC8	C	490	507	Right-handed alpha
Helix 27	AC9	C	511	521	Right-handed alpha
Helix 28	AD1	D	20	25	Right-handed alpha
Helix 29	AD2	D	35	42	Right-handed alpha
Helix 30	AD3	D	66	70	Right-handed 310
Helix 31	AD4	D	92	109	Right-handed alpha
Helix 32	AD5	D	132	143	Right-handed alpha
Helix 33	AD6	D	157	173	Right-handed alpha
Helix 34	AD7	E	343	362	Right-handed alpha
Helix 35	AD8	E	364	383	Right-handed alpha
Helix 36	AD9	E	385	390	Right-handed alpha
Helix 37	AE1	E	391	394	Right-handed 310
Helix 38	AE2	E	399	420	Right-handed alpha
Helix 39	AE3	E	427	448	Right-handed alpha
Helix 40	AE4	E	463	479	Right-handed alpha
Helix 41	AE5	E	490	507	Right-handed alpha
Helix 42	AE6	E	511	521	Right-handed alpha
Helix 43	AE7	F	20	29	Right-handed alpha
Helix 44	AE8	F	36	42	Right-handed alpha
Helix 45	AE9	F	66	70	Right-handed 310
Helix 46	AF1	F	74	78	Right-handed 310
Helix 47	AF2	F	92	110	Right-handed alpha
Helix 48	AF3	F	132	143	Right-handed alpha
Helix 49	AF4	F	157	173	Right-handed alpha
Helix 50	AF5	G	342	362	Right-handed alpha
Helix 51	AF6	G	364	382	Right-handed alpha
Helix 52	AF7	G	385	390	Right-handed alpha
Helix 53	AF8	G	391	394	Right-handed 310
Helix 54	AF9	G	399	420	Right-handed alpha
Helix 55	AG1	G	427	448	Right-handed alpha
Helix 56	AG2	G	463	479	Right-handed alpha
Helix 57	AG3	G	490	507	Right-handed alpha
Helix 58	AG4	G	511	521	Right-handed alpha
Helix 59	AG5	H	20	25	Right-handed alpha
Helix 60	AG6	H	26	28	Right-handed 310
Helix 61	AG7	H	35	42	Right-handed alpha
Helix 62	AG8	H	66	70	Right-handed 310
Helix 63	AG9	H	74	79	Right-handed alpha
Helix 64	AH1	H	92	110	Right-handed alpha
Helix 65	AH2	H	132	143	Right-handed alpha
Helix 66	AH3	H	157	173	Right-handed alpha
Helix 67	AH4	I	341	362	Right-handed alpha
Helix 68	AH5	I	364	382	Right-handed alpha
Helix 69	AH6	I	385	390	Right-handed alpha
Helix 70	AH7	I	391	394	Right-handed 310
Helix 71	AH8	I	399	420	Right-handed alpha
Helix 72	AH9	I	427	448	Right-handed alpha
Helix 73	AI1	I	463	479	Right-handed alpha
Helix 74	AI2	I	490	507	Right-handed alpha
Helix 75	AI3	I	511	521	Right-handed alpha
Helix 76	AI4	J	20	25	Right-handed alpha
Helix 77	AI5	J	26	28	Right-handed 310
Helix 78	AI6	J	35	42	Right-handed alpha
Helix 79	AI7	J	66	70	Right-handed 310
Helix 80	AI8	J	74	79	Right-handed alpha
Helix 81	AI9	J	92	110	Right-handed alpha
Helix 82	AJ1	J	132	143	Right-handed alpha
Helix 83	AJ2	J	157	173	Right-handed alpha
Helix 84	AJ3	K	342	362	Right-handed alpha
Helix 85	AJ4	K	364	382	Right-handed alpha
Helix 86	AJ5	K	385	390	Right-handed alpha
Helix 87	AJ6	K	391	394	Right-handed 310
Helix 88	AJ7	K	399	420	Right-handed alpha
Helix 89	AJ8	K	427	448	Right-handed alpha
Helix 90	AJ9	K	463	479	Right-handed alpha
Helix 91	AK1	K	490	507	Right-handed alpha
Helix 92	AK2	K	511	521	Right-handed alpha
Helix 93	AK3	L	20	27	Right-handed alpha
Helix 94	AK4	L	66	70	Right-handed 310
Helix 95	AK5	L	92	110	Right-handed alpha
Helix 96	AK6	L	132	143	Right-handed alpha
Helix 97	AK7	L	157	173	Right-handed alpha

There are 12 sheets in PDB entry 5O74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	484	485	first strand
Strand 2	A	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	52	first strand
Strand 2	B	55	62	anti-parallel
Strand 3	B	7	14	parallel
Strand 4	B	83	89	parallel
Strand 5	B	115	121	parallel
Strand 6	B	147	150	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	484	485	first strand
Strand 2	C	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	52	first strand
Strand 2	D	55	62	anti-parallel
Strand 3	D	7	14	parallel
Strand 4	D	83	89	parallel
Strand 5	D	115	121	parallel
Strand 6	D	147	150	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	484	485	first strand
Strand 2	E	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	52	first strand
Strand 2	F	55	62	anti-parallel
Strand 3	F	7	14	parallel
Strand 4	F	83	89	parallel
Strand 5	F	115	121	parallel
Strand 6	F	147	150	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	484	485	first strand
Strand 2	G	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	52	first strand
Strand 2	H	55	62	anti-parallel
Strand 3	H	7	14	parallel
Strand 4	H	83	89	parallel
Strand 5	H	115	121	parallel
Strand 6	H	147	150	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	484	485	first strand
Strand 2	I	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	52	first strand
Strand 2	J	55	62	anti-parallel
Strand 3	J	7	14	parallel
Strand 4	J	83	89	parallel
Strand 5	J	115	121	parallel
Strand 6	J	147	150	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	484	485	first strand
Strand 2	K	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	45	52	first strand
Strand 2	L	55	62	anti-parallel
Strand 3	L	7	14	parallel
Strand 4	L	83	89	parallel
Strand 5	L	115	121	parallel
Strand 6	L	147	150	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5O74

Analysis of interatomic Contacts of Structural Units in PDB entry:
5O74