Analysis of interatomic Contacts of Structural Units in PDB entry:
5O76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O76 entry

There are 10 chains in PDB entry 5O76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 50LEU 370
A
 CYS 372PHE 434
B
 ASP 5GLY 6
B
 THR 8PRO 11
C
 PRO 48LEU 370
C
 CYS 372PHE 434
D
 SER 4GLY 6
D
 THR 8ALA 12
E
 SER 0ARG 72
F
 GLY -1ARG 72
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5O76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 71Right-handed alpha
Helix 2
AA2
A
83 102Right-handed alpha
Helix 3
AA3
A
105 111Right-handed alpha
Helix 4
AA4
A
112 135Right-handed alpha
Helix 5
AA5
A
137 141Right-handed 310
Helix 6
AA6
A
145 169Right-handed alpha
Helix 7
AA7
A
170 173Right-handed 310
Helix 8
AA8
A
175 179Right-handed 310
Helix 9
AA9
A
183 195Right-handed alpha
Helix 10
AB1
A
202 213Right-handed alpha
Helix 11
AB2
A
217 229Right-handed alpha
Helix 12
AB3
A
238 248Right-handed alpha
Helix 13
AB4
A
250 252Right-handed 310
Helix 14
AB5
A
253 263Right-handed alpha
Helix 15
AB6
A
273 282Right-handed alpha
Helix 16
AB7
A
283 285Right-handed 310
Helix 17
AB8
A
323 334Right-handed alpha
Helix 18
AB9
A
364 375Right-handed alpha
Helix 19
AC1
A
401 411Right-handed alpha
Helix 20
AC2
C
52 71Right-handed alpha
Helix 21
AC3
C
72 76Right-handed 310
Helix 22
AC4
C
83 102Right-handed alpha
Helix 23
AC5
C
105 112Right-handed alpha
Helix 24
AC6
C
112 137Right-handed alpha
Helix 25
AC7
C
145 169Right-handed alpha
Helix 26
AC8
C
183 194Right-handed alpha
Helix 27
AC9
C
202 213Right-handed alpha
Helix 28
AD1
C
217 229Right-handed alpha
Helix 29
AD2
C
238 248Right-handed alpha
Helix 30
AD3
C
250 252Right-handed 310
Helix 31
AD4
C
253 262Right-handed alpha
Helix 32
AD5
C
273 282Right-handed alpha
Helix 33
AD6
C
323 334Right-handed alpha
Helix 34
AD7
C
349 353Right-handed 310
Helix 35
AD8
C
364 374Right-handed alpha
Helix 36
AD9
C
401 412Right-handed alpha
Helix 37
AE1
E
22 35Right-handed alpha
Helix 38
AE2
E
37 39Right-handed 310
Helix 39
AE3
E
56 60Right-handed 310
Helix 40
AE4
F
22 35Right-handed alpha
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There are 10 sheets in PDB entry 5O76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 201first strand
Strand 2
A
235 237anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
290 295parallel
Strand 3
A
303 307anti-parallel
Strand 4
A
315 317anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 271first strand
Strand 2
A
290 295parallel
Strand 3
A
339 340parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 362first strand
Strand 2
A
425 432parallel
Strand 3
A
391 394anti-parallel
Strand 4
A
399 400anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
199 201first strand
Strand 2
C
235 237anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
268 269first strand
Strand 2
C
290 295parallel
Strand 3
C
339 340parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
268 269first strand
Strand 2
C
290 295parallel
Strand 3
C
303 307anti-parallel
Strand 4
C
315 317anti-parallel
Strand 5
D
7 8parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
359 362first strand
Strand 2
C
425 432parallel
Strand 3
C
391 394anti-parallel
Strand 4
C
399 400anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 17first strand
Strand 2
E
1 6anti-parallel
Strand 3
E
66 71parallel
Strand 4
E
41 45anti-parallel
Strand 5
E
48 49anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
13 17first strand
Strand 2
F
1 6anti-parallel
Strand 3
F
66 71parallel
Strand 4
F
41 45anti-parallel
Strand 5
F
48 49anti-parallel
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