Analysis of interatomic Contacts of Structural Units in PDB entry:
5O7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O7V entry

There are 16 chains in PDB entry 5O7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2SER 9
A
 GLY 11CYS 30
A
 ASP 32GLY 35
A
 TYR 37SER 52
A
 LEU 54GLU 73
A
 CYS 75CYS 75
A
 ASP 77GLY 80
A
 THR 82ASN 90
B
 SER 2SER 9
B
 GLY 11CYS 30
B
 ASP 32GLY 35
B
 TYR 37SER 52
B
 LEU 54GLU 73
B
 CYS 75CYS 75
B
 ASP 77GLY 80
B
 THR 82ASN 90
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 5O7V

There are 4 sheets in PDB entry 5O7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
15 22anti-parallel
Strand 3
A
25 31anti-parallel
Strand 4
A
36 44anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 55first strand
Strand 2
A
58 67anti-parallel
Strand 3
A
70 76anti-parallel
Strand 4
A
81 83anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 10first strand
Strand 2
B
15 22anti-parallel
Strand 3
B
25 31anti-parallel
Strand 4
B
36 44anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 55first strand
Strand 2
B
58 67anti-parallel
Strand 3
B
70 76anti-parallel
Strand 4
B
81 83anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il