Analysis of interatomic Contacts of Structural Units in PDB entry:
5O8Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O8Z entry

There are 2 chains in PDB entry 5O8Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 210
B
 ASN 2LEU 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5O8Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
37 45Right-handed alpha
Helix 3
AA3
A
46 48Right-handed 310
Helix 4
AA4
A
66 78Right-handed alpha
Helix 5
AA5
A
91 101Right-handed alpha
Helix 6
AA6
A
114 126Right-handed alpha
Helix 7
AA7
A
132 143Right-handed alpha
Helix 8
AA8
A
152 165Right-handed alpha
Helix 9
AA9
A
167 174Right-handed alpha
Helix 10
AB1
A
178 194Right-handed alpha
Helix 11
AB2
A
197 209Right-handed alpha
Helix 12
AB3
B
12 24Right-handed alpha
Helix 13
AB4
B
37 45Right-handed alpha
Helix 14
AB5
B
46 48Right-handed 310
Helix 15
AB6
B
66 78Right-handed alpha
Helix 16
AB7
B
91 101Right-handed alpha
Helix 17
AB8
B
114 125Right-handed alpha
Helix 18
AB9
B
131 145Right-handed alpha
Helix 19
AC1
B
152 163Right-handed alpha
Helix 20
AC2
B
167 176Right-handed alpha
Helix 21
AC3
B
178 194Right-handed alpha
Helix 22
AC4
B
197 208Right-handed alpha
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There are 2 sheets in PDB entry 5O8Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 35first strand
Strand 2
A
4 9parallel
Strand 3
A
52 55parallel
Strand 4
A
82 87parallel
Strand 5
A
105 108parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 35first strand
Strand 2
B
4 9parallel
Strand 3
B
52 55parallel
Strand 4
B
82 87parallel
Strand 5
B
105 108parallel
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