Analysis of interatomic Contacts of Structural Units in PDB entry:
5O95

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5O95 entry

There are 4 chains in PDB entry 5O95 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 3	LEU 244
B	PRO 1	LEU 244
C	PRO 1	LEU 244
D	ARG 4	LEU 244

There are 30 helices in PDB entry 5O95. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	32	Right-handed alpha
Helix 2	AA2	A	93	104	Right-handed alpha
Helix 3	AA3	A	122	145	Right-handed alpha
Helix 4	AA4	A	158	165	Right-handed alpha
Helix 5	AA5	A	175	179	Right-handed 310
Helix 6	AA6	A	180	184	Right-handed 310
Helix 7	AA7	A	202	212	Right-handed alpha
Helix 8	AA8	A	225	242	Right-handed alpha
Helix 9	AA9	B	23	32	Right-handed alpha
Helix 10	AB1	B	92	104	Right-handed alpha
Helix 11	AB2	B	122	145	Right-handed alpha
Helix 12	AB3	B	158	165	Right-handed alpha
Helix 13	AB4	B	180	184	Right-handed 310
Helix 14	AB5	B	202	212	Right-handed alpha
Helix 15	AB6	B	225	242	Right-handed alpha
Helix 16	AB7	C	23	32	Right-handed alpha
Helix 17	AB8	C	92	104	Right-handed alpha
Helix 18	AB9	C	122	145	Right-handed alpha
Helix 19	AC1	C	158	165	Right-handed alpha
Helix 20	AC2	C	180	184	Right-handed 310
Helix 21	AC3	C	202	212	Right-handed alpha
Helix 22	AC4	C	225	242	Right-handed alpha
Helix 23	AC5	D	23	32	Right-handed alpha
Helix 24	AC6	D	91	104	Right-handed alpha
Helix 25	AC7	D	122	145	Right-handed alpha
Helix 26	AC8	D	158	165	Right-handed alpha
Helix 27	AC9	D	175	179	Right-handed 310
Helix 28	AD1	D	180	184	Right-handed 310
Helix 29	AD2	D	202	212	Right-handed alpha
Helix 30	AD3	D	225	242	Right-handed alpha

There are 12 sheets in PDB entry 5O95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	7	9	first strand
Strand 2	A	41	45	parallel
Strand 3	A	50	60	anti-parallel
Strand 4	A	63	73	anti-parallel
Strand 5	A	19	21	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	152	first strand
Strand 2	A	108	113	parallel
Strand 3	A	156	157	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	152	first strand
Strand 2	A	108	113	parallel
Strand 3	A	81	87	parallel
Strand 4	A	190	195	parallel
Strand 5	A	170	173	parallel
Strand 6	A	215	217	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	9	first strand
Strand 2	B	41	45	parallel
Strand 3	B	50	60	anti-parallel
Strand 4	B	63	73	anti-parallel
Strand 5	B	19	21	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	108	113	parallel
Strand 3	B	156	157	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	108	113	parallel
Strand 3	B	81	87	parallel
Strand 4	B	190	195	parallel
Strand 5	B	169	173	parallel
Strand 6	B	215	217	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	9	first strand
Strand 2	C	41	45	parallel
Strand 3	C	50	60	anti-parallel
Strand 4	C	63	73	anti-parallel
Strand 5	C	19	21	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	152	first strand
Strand 2	C	108	113	parallel
Strand 3	C	156	157	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	152	first strand
Strand 2	C	108	113	parallel
Strand 3	C	81	87	parallel
Strand 4	C	190	195	parallel
Strand 5	C	169	173	parallel
Strand 6	C	215	217	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	7	9	first strand
Strand 2	D	41	45	parallel
Strand 3	D	50	60	anti-parallel
Strand 4	D	63	73	anti-parallel
Strand 5	D	19	21	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	152	first strand
Strand 2	D	108	113	parallel
Strand 3	D	156	157	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	152	first strand
Strand 2	D	108	113	parallel
Strand 3	D	81	87	parallel
Strand 4	D	190	195	parallel
Strand 5	D	170	173	parallel
Strand 6	D	215	217	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5O95

Analysis of interatomic Contacts of Structural Units in PDB entry:
5O95