Analysis of interatomic Contacts of Structural Units in PDB entry:
5O9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5O9H entry

There are 2 chains in PDB entry 5O9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 31ARG 330
B
 ASN 31GLU 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5O9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 64Right-handed alpha
Helix 2
AA2
A
69 88Right-handed alpha
Helix 3
AA3
A
88 98Right-handed alpha
Helix 4
AA4
A
104 112Right-handed alpha
Helix 5
AA5
A
114 140Right-handed alpha
Helix 6
AA6
A
140 148Right-handed alpha
Helix 7
AA7
A
149 175Right-handed alpha
Helix 8
AA8
A
195 211Right-handed alpha
Helix 9
AA9
A
211 232Right-handed alpha
Helix 10
AB1
A
238 267Right-handed alpha
Helix 11
AB2
A
272 281Right-handed alpha
Helix 12
AB3
A
281 291Right-handed alpha
Helix 13
AB4
A
294 307Right-handed alpha
Helix 14
AB5
A
314 324Right-handed alpha
Helix 15
AB6
B
34 64Right-handed alpha
Helix 16
AB7
B
69 87Right-handed alpha
Helix 17
AB8
B
88 98Right-handed alpha
Helix 18
AB9
B
104 112Right-handed alpha
Helix 19
AC1
B
114 140Right-handed alpha
Helix 20
AC2
B
140 148Right-handed alpha
Helix 21
AC3
B
149 174Right-handed alpha
Helix 22
AC4
B
197 211Right-handed alpha
Helix 23
AC5
B
211 232Right-handed alpha
Helix 24
AC6
B
238 265Right-handed alpha
Helix 25
AC7
B
272 281Right-handed alpha
Helix 26
AC8
B
281 290Right-handed alpha
Helix 27
AC9
B
291 305Right-handed alpha
Helix 28
AD1
B
314 324Right-handed alpha
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There are 2 sheets in PDB entry 5O9H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 180first strand
Strand 2
A
185 189anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 180first strand
Strand 2
B
185 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il