Analysis of interatomic Contacts of Structural Units in PDB entry:
5OAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OAW entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 5OAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 68
A
 HIS 70THR 541
B
 SER 3ASP 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5OAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
39 57Right-handed alpha
Helix 3
AA3
A
89 91Right-handed 310
Helix 4
AA4
A
92 102Right-handed alpha
Helix 5
AA5
A
110 118Right-handed alpha
Helix 6
AA6
A
137 152Right-handed alpha
Helix 7
AA7
A
163 177Right-handed alpha
Helix 8
AA8
A
187 203Right-handed alpha
Helix 9
AA9
A
220 232Right-handed alpha
Helix 10
AB1
A
249 253Right-handed 310
Helix 11
AB2
A
258 266Right-handed alpha
Helix 12
AB3
A
305 324Right-handed alpha
Helix 13
AB4
A
341 351Right-handed alpha
Helix 14
AB5
A
362 371Right-handed alpha
Helix 15
AB6
A
390 400Right-handed alpha
Helix 16
AB7
A
408 421Right-handed alpha
Helix 17
AB8
A
427 442Right-handed alpha
Helix 18
AB9
A
445 451Right-handed alpha
Helix 19
AC1
A
467 471Right-handed 310
Helix 20
AC2
A
485 496Right-handed alpha
Helix 21
AC3
A
521 540Right-handed alpha
Helix 22
AC4
B
4 5Right-handed 310
Helix 23
AC5
B
7 7Right-handed 310
Helix 24
AC6
B
8 17Right-handed alpha
Helix 25
AC7
B
40 57Right-handed alpha
Helix 26
AC8
B
93 101Right-handed alpha
Helix 27
AC9
B
111 117Right-handed alpha
Helix 28
AD1
B
137 152Right-handed alpha
Helix 29
AD2
B
163 177Right-handed alpha
Helix 30
AD3
B
187 203Right-handed alpha
Helix 31
AD4
B
220 232Right-handed alpha
Helix 32
AD5
B
249 253Right-handed 310
Helix 33
AD6
B
258 266Right-handed alpha
Helix 34
AD7
B
305 324Right-handed alpha
Helix 35
AD8
B
341 351Right-handed alpha
Helix 36
AD9
B
362 371Right-handed alpha
Helix 37
AE1
B
390 400Right-handed alpha
Helix 38
AE2
B
404 421Right-handed alpha
Helix 39
AE3
B
427 443Right-handed alpha
Helix 40
AE4
B
445 451Right-handed alpha
Helix 41
AE5
B
467 471Right-handed 310
Helix 42
AE6
B
485 496Right-handed alpha
Helix 43
AE7
B
521 537Right-handed alpha
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There are 10 sheets in PDB entry 5OAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
75 81anti-parallel
Strand 3
A
61 66anti-parallel
Strand 4
A
127 132parallel
Strand 5
A
155 161parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
211 215parallel
Strand 3
A
279 283parallel
Strand 4
A
290 295anti-parallel
Strand 5
A
301 304anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 358first strand
Strand 2
A
332 336parallel
Strand 3
A
375 379parallel
Strand 4
A
385 389anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 463first strand
Strand 2
A
513 518anti-parallel
Strand 3
A
501 506anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 474first strand
Strand 2
A
479 482anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
61 66anti-parallel
Strand 3
B
127 132parallel
Strand 4
B
155 161parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
211 215parallel
Strand 3
B
279 283parallel
Strand 4
B
290 295anti-parallel
Strand 5
B
301 304anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 358first strand
Strand 2
B
332 336parallel
Strand 3
B
375 379parallel
Strand 4
B
385 389anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
458 463first strand
Strand 2
B
513 518anti-parallel
Strand 3
B
501 506anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
472 474first strand
Strand 2
B
479 482anti-parallel
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