Analysis of interatomic Contacts of Structural Units in PDB entry:
5OD9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OD9 entry

There are 2 chains in PDB entry 5OD9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1001ASP 1095
B
 SER 2002GLN 2093
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5OD9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1002 1022Right-handed alpha
Helix 2
AA2
A
1023 1046Right-handed alpha
Helix 3
AA3
A
1051 1071Right-handed alpha
Helix 4
AA4
A
1072 1091Right-handed alpha
Helix 5
AA5
B
2003 2022Right-handed alpha
Helix 6
AA6
B
2023 2046Right-handed alpha
Helix 7
AA7
B
2052 2071Right-handed alpha
Helix 8
AA8
B
2072 2093Right-handed alpha
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There are no sheets in PDB entry 5OD9
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