Analysis of interatomic Contacts of Structural Units in PDB entry:
5OE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OE7 entry

There are 3 chains in PDB entry 5OE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 78THR 350
B
 MET 1GLY 75
B
 MET 77VAL 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5OE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 96Right-handed alpha
Helix 2
AA2
A
100 116Right-handed alpha
Helix 3
AA3
A
128 141Right-handed alpha
Helix 4
AA4
A
146 151Right-handed alpha
Helix 5
AA5
A
156 165Right-handed alpha
Helix 6
AA6
A
166 171Right-handed 310
Helix 7
AA7
A
184 204Right-handed alpha
Helix 8
AA8
A
207 221Right-handed alpha
Helix 9
AA9
A
222 249Right-handed alpha
Helix 10
AB1
A
254 261Right-handed alpha
Helix 11
AB2
A
262 267Right-handed 310
Helix 12
AB3
A
268 276Right-handed alpha
Helix 13
AB4
A
288 299Right-handed alpha
Helix 14
AB5
A
308 310Right-handed 310
Helix 15
AB6
A
312 314Right-handed 310
Helix 16
AB7
B
22 35Right-handed alpha
Helix 17
AB8
B
37 41Right-handed 310
Helix 18
AB9
B
98 111Right-handed alpha
Helix 19
AC1
B
113 117Right-handed 310
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There are 5 sheets in PDB entry 5OE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
117 121anti-parallel
Strand 3
A
342 345anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
B
74 75anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 319first strand
Strand 2
A
301 306anti-parallel
Strand 3
A
329 334parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
66 69parallel
Strand 4
B
43 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 92first strand
Strand 2
B
78 82anti-parallel
Strand 3
B
142 146parallel
Strand 4
B
118 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il