Analysis of interatomic Contacts of Structural Units in PDB entry:
5OE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OE9 entry

There are 3 chains in PDB entry 5OE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 13ASN 418
B
 PRO 13ARG 421
C
 PRO 13TYR 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5OE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 24Right-handed alpha
Helix 2
AA2
A
46 63Right-handed alpha
Helix 3
AA3
A
74 82Right-handed alpha
Helix 4
AA4
A
82 93Right-handed alpha
Helix 5
AA5
A
126 131Right-handed alpha
Helix 6
AA6
A
144 147Right-handed 310
Helix 7
AA7
A
148 158Right-handed alpha
Helix 8
AA8
A
177 183Right-handed alpha
Helix 9
AA9
A
186 191Right-handed alpha
Helix 10
AB1
A
198 202Right-handed 310
Helix 11
AB2
A
206 215Right-handed alpha
Helix 12
AB3
A
219 226Right-handed alpha
Helix 13
AB4
A
291 296Right-handed alpha
Helix 14
AB5
A
300 312Right-handed alpha
Helix 15
AB6
A
329 339Right-handed alpha
Helix 16
AB7
A
349 363Right-handed alpha
Helix 17
AB8
A
372 380Right-handed alpha
Helix 18
AB9
A
385 391Right-handed alpha
Helix 19
AC1
A
401 415Right-handed alpha
Helix 20
AC2
B
15 24Right-handed alpha
Helix 21
AC3
B
46 63Right-handed alpha
Helix 22
AC4
B
74 82Right-handed alpha
Helix 23
AC5
B
82 93Right-handed alpha
Helix 24
AC6
B
124 134Right-handed alpha
Helix 25
AC7
B
144 147Right-handed 310
Helix 26
AC8
B
148 158Right-handed alpha
Helix 27
AC9
B
177 183Right-handed alpha
Helix 28
AD1
B
186 191Right-handed alpha
Helix 29
AD2
B
198 202Right-handed 310
Helix 30
AD3
B
206 215Right-handed alpha
Helix 31
AD4
B
219 226Right-handed alpha
Helix 32
AD5
B
291 296Right-handed alpha
Helix 33
AD6
B
300 312Right-handed alpha
Helix 34
AD7
B
329 339Right-handed alpha
Helix 35
AD8
B
349 363Right-handed alpha
Helix 36
AD9
B
372 380Right-handed alpha
Helix 37
AE1
B
385 391Right-handed alpha
Helix 38
AE2
B
401 415Right-handed alpha
Helix 39
AE3
C
15 24Right-handed alpha
Helix 40
AE4
C
46 63Right-handed alpha
Helix 41
AE5
C
74 82Right-handed alpha
Helix 42
AE6
C
82 93Right-handed alpha
Helix 43
AE7
C
124 134Right-handed alpha
Helix 44
AE8
C
144 147Right-handed 310
Helix 45
AE9
C
148 158Right-handed alpha
Helix 46
AF1
C
177 183Right-handed alpha
Helix 47
AF2
C
186 191Right-handed alpha
Helix 48
AF3
C
198 202Right-handed 310
Helix 49
AF4
C
206 215Right-handed alpha
Helix 50
AF5
C
219 226Right-handed alpha
Helix 51
AF6
C
291 296Right-handed alpha
Helix 52
AF7
C
300 312Right-handed alpha
Helix 53
AF8
C
329 339Right-handed alpha
Helix 54
AF9
C
349 363Right-handed alpha
Helix 55
AG1
C
372 380Right-handed alpha
Helix 56
AG2
C
385 391Right-handed alpha
Helix 57
AG3
C
401 415Right-handed alpha
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There are 7 sheets in PDB entry 5OE9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
105 110anti-parallel
Strand 3
A
113 121anti-parallel
Strand 4
A
67 72parallel
Strand 5
A
138 142parallel
Strand 6
A
165 170parallel
Strand 7
A
36 41parallel
Strand 8
A
192 197parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
366 369parallel
Strand 3
A
281 290parallel
Strand 4
A
270 278anti-parallel
Strand 5
A
257 263anti-parallel
Strand 6
A
320 325parallel
Strand 7
A
343 345parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 100first strand
Strand 2
B
105 110anti-parallel
Strand 3
B
113 121anti-parallel
Strand 4
B
67 72parallel
Strand 5
B
138 142parallel
Strand 6
B
165 170parallel
Strand 7
B
36 41parallel
Strand 8
B
192 197parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 248first strand
Strand 2
B
366 369parallel
Strand 3
B
281 290parallel
Strand 4
B
270 278anti-parallel
Strand 5
B
257 263anti-parallel
Strand 6
B
320 325parallel
Strand 7
B
343 345parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 100first strand
Strand 2
C
105 110anti-parallel
Strand 3
C
113 121anti-parallel
Strand 4
C
67 72parallel
Strand 5
C
138 142parallel
Strand 6
C
165 170parallel
Strand 7
C
36 41parallel
Strand 8
C
192 197parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
247 248first strand
Strand 2
C
366 369parallel
Strand 3
C
281 290parallel
Strand 4
C
270 278anti-parallel
Strand 5
C
257 263anti-parallel
Strand 6
C
320 325parallel
Strand 7
C
343 345parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
416 420first strand
Strand 2
C
423 426anti-parallel
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