Analysis of interatomic Contacts of Structural Units in PDB entry:
5OEE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OEE entry

There are 6 chains in PDB entry 5OEE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 13	PHE 416
B	PHE 11	PHE 416
C	PRO 13	GLY 417
D	PRO 13	GLY 417
E	PRO 13	PHE 416
F	PRO 13	PHE 416

There are117 helices in PDB entry 5OEE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	24	Right-handed alpha
Helix 2	AA2	A	47	63	Right-handed alpha
Helix 3	AA3	A	74	82	Right-handed alpha
Helix 4	AA4	A	82	93	Right-handed alpha
Helix 5	AA5	A	124	131	Right-handed alpha
Helix 6	AA6	A	143	147	Right-handed 310
Helix 7	AA7	A	148	158	Right-handed alpha
Helix 8	AA8	A	177	183	Right-handed alpha
Helix 9	AA9	A	184	187	Right-handed 310
Helix 10	AB1	A	198	202	Right-handed 310
Helix 11	AB2	A	206	216	Right-handed alpha
Helix 12	AB3	A	219	226	Right-handed alpha
Helix 13	AB4	A	291	296	Right-handed alpha
Helix 14	AB5	A	300	312	Right-handed alpha
Helix 15	AB6	A	329	339	Right-handed alpha
Helix 16	AB7	A	349	363	Right-handed alpha
Helix 17	AB8	A	372	382	Right-handed alpha
Helix 18	AB9	A	385	390	Right-handed alpha
Helix 19	AC1	A	401	415	Right-handed alpha
Helix 20	AC2	B	15	24	Right-handed alpha
Helix 21	AC3	B	47	63	Right-handed alpha
Helix 22	AC4	B	74	82	Right-handed alpha
Helix 23	AC5	B	82	93	Right-handed alpha
Helix 24	AC6	B	124	131	Right-handed alpha
Helix 25	AC7	B	144	147	Right-handed 310
Helix 26	AC8	B	148	158	Right-handed alpha
Helix 27	AC9	B	177	183	Right-handed alpha
Helix 28	AD1	B	198	202	Right-handed 310
Helix 29	AD2	B	206	217	Right-handed alpha
Helix 30	AD3	B	219	226	Right-handed alpha
Helix 31	AD4	B	291	296	Right-handed alpha
Helix 32	AD5	B	300	313	Right-handed alpha
Helix 33	AD6	B	329	339	Right-handed alpha
Helix 34	AD7	B	349	364	Right-handed alpha
Helix 35	AD8	B	372	382	Right-handed alpha
Helix 36	AD9	B	385	390	Right-handed alpha
Helix 37	AE1	B	401	415	Right-handed alpha
Helix 38	AE2	C	15	24	Right-handed alpha
Helix 39	AE3	C	47	63	Right-handed alpha
Helix 40	AE4	C	74	82	Right-handed alpha
Helix 41	AE5	C	82	93	Right-handed alpha
Helix 42	AE6	C	144	147	Right-handed 310
Helix 43	AE7	C	148	158	Right-handed alpha
Helix 44	AE8	C	177	183	Right-handed alpha
Helix 45	AE9	C	186	191	Right-handed alpha
Helix 46	AF1	C	198	202	Right-handed 310
Helix 47	AF2	C	206	216	Right-handed alpha
Helix 48	AF3	C	219	226	Right-handed alpha
Helix 49	AF4	C	242	246	Right-handed alpha
Helix 50	AF5	C	291	296	Right-handed alpha
Helix 51	AF6	C	300	312	Right-handed alpha
Helix 52	AF7	C	316	318	Right-handed 310
Helix 53	AF8	C	329	339	Right-handed alpha
Helix 54	AF9	C	349	364	Right-handed alpha
Helix 55	AG1	C	372	380	Right-handed alpha
Helix 56	AG2	C	385	391	Right-handed alpha
Helix 57	AG3	C	401	415	Right-handed alpha
Helix 58	AG4	D	15	24	Right-handed alpha
Helix 59	AG5	D	47	63	Right-handed alpha
Helix 60	AG6	D	74	82	Right-handed alpha
Helix 61	AG7	D	82	93	Right-handed alpha
Helix 62	AG8	D	124	134	Right-handed alpha
Helix 63	AG9	D	144	147	Right-handed 310
Helix 64	AH1	D	148	158	Right-handed alpha
Helix 65	AH2	D	177	183	Right-handed alpha
Helix 66	AH3	D	186	191	Right-handed alpha
Helix 67	AH4	D	198	202	Right-handed 310
Helix 68	AH5	D	206	216	Right-handed alpha
Helix 69	AH6	D	219	226	Right-handed alpha
Helix 70	AH7	D	242	246	Right-handed alpha
Helix 71	AH8	D	291	296	Right-handed alpha
Helix 72	AH9	D	300	312	Right-handed alpha
Helix 73	AI1	D	329	339	Right-handed alpha
Helix 74	AI2	D	349	363	Right-handed alpha
Helix 75	AI3	D	372	380	Right-handed alpha
Helix 76	AI4	D	385	390	Right-handed alpha
Helix 77	AI5	D	401	414	Right-handed alpha
Helix 78	AI6	E	15	24	Right-handed alpha
Helix 79	AI7	E	46	63	Right-handed alpha
Helix 80	AI8	E	74	82	Right-handed alpha
Helix 81	AI9	E	82	93	Right-handed alpha
Helix 82	AJ1	E	124	134	Right-handed alpha
Helix 83	AJ2	E	143	147	Right-handed 310
Helix 84	AJ3	E	148	157	Right-handed alpha
Helix 85	AJ4	E	177	183	Right-handed alpha
Helix 86	AJ5	E	186	191	Right-handed alpha
Helix 87	AJ6	E	198	202	Right-handed 310
Helix 88	AJ7	E	206	216	Right-handed alpha
Helix 89	AJ8	E	219	226	Right-handed alpha
Helix 90	AJ9	E	242	246	Right-handed alpha
Helix 91	AK1	E	291	296	Right-handed alpha
Helix 92	AK2	E	300	312	Right-handed alpha
Helix 93	AK3	E	329	339	Right-handed alpha
Helix 94	AK4	E	349	364	Right-handed alpha
Helix 95	AK5	E	372	380	Right-handed alpha
Helix 96	AK6	E	385	390	Right-handed alpha
Helix 97	AK7	E	401	415	Right-handed alpha
Helix 98	AK8	F	15	24	Right-handed alpha
Helix 99	AK9	F	47	63	Right-handed alpha
Helix 100	AL1	F	74	82	Right-handed alpha
Helix 101	AL2	F	82	93	Right-handed alpha
Helix 102	AL3	F	130	134	Right-handed 310
Helix 103	AL4	F	144	147	Right-handed 310
Helix 104	AL5	F	148	158	Right-handed alpha
Helix 105	AL6	F	177	183	Right-handed alpha
Helix 106	AL7	F	186	191	Right-handed alpha
Helix 107	AL8	F	198	202	Right-handed 310
Helix 108	AL9	F	206	217	Right-handed alpha
Helix 109	AM1	F	219	226	Right-handed alpha
Helix 110	AM2	F	291	296	Right-handed alpha
Helix 111	AM3	F	300	312	Right-handed alpha
Helix 112	AM4	F	316	318	Right-handed 310
Helix 113	AM5	F	329	339	Right-handed alpha
Helix 114	AM6	F	349	363	Right-handed alpha
Helix 115	AM7	F	372	380	Right-handed alpha
Helix 116	AM8	F	385	390	Right-handed alpha
Helix 117	AM9	F	401	415	Right-handed alpha

There are 12 sheets in PDB entry 5OEE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	100	first strand
Strand 2	A	105	110	anti-parallel
Strand 3	A	113	121	anti-parallel
Strand 4	A	67	72	parallel
Strand 5	A	138	141	parallel
Strand 6	A	165	170	parallel
Strand 7	A	36	41	parallel
Strand 8	A	192	197	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	248	first strand
Strand 2	A	366	369	parallel
Strand 3	A	282	290	parallel
Strand 4	A	270	277	anti-parallel
Strand 5	A	258	262	anti-parallel
Strand 6	A	320	325	parallel
Strand 7	A	343	345	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	100	first strand
Strand 2	B	105	109	anti-parallel
Strand 3	B	114	121	anti-parallel
Strand 4	B	67	72	parallel
Strand 5	B	138	142	parallel
Strand 6	B	165	170	parallel
Strand 7	B	36	41	parallel
Strand 8	B	192	197	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	248	first strand
Strand 2	B	366	369	parallel
Strand 3	B	282	290	parallel
Strand 4	B	270	277	anti-parallel
Strand 5	B	258	263	anti-parallel
Strand 6	B	320	325	parallel
Strand 7	B	343	345	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	100	first strand
Strand 2	C	105	110	anti-parallel
Strand 3	C	113	121	anti-parallel
Strand 4	C	67	72	parallel
Strand 5	C	138	142	parallel
Strand 6	C	165	169	parallel
Strand 7	C	36	39	parallel
Strand 8	C	193	194	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	248	first strand
Strand 2	C	366	369	parallel
Strand 3	C	281	290	parallel
Strand 4	C	270	278	anti-parallel
Strand 5	C	258	263	anti-parallel
Strand 6	C	320	325	parallel
Strand 7	C	343	345	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	100	first strand
Strand 2	D	105	110	anti-parallel
Strand 3	D	113	121	anti-parallel
Strand 4	D	67	72	parallel
Strand 5	D	138	142	parallel
Strand 6	D	165	170	parallel
Strand 7	D	36	41	parallel
Strand 8	D	193	197	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	248	first strand
Strand 2	D	366	369	parallel
Strand 3	D	281	290	parallel
Strand 4	D	270	278	anti-parallel
Strand 5	D	258	263	anti-parallel
Strand 6	D	320	325	parallel
Strand 7	D	343	345	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	100	first strand
Strand 2	E	105	109	anti-parallel
Strand 3	E	114	121	anti-parallel
Strand 4	E	67	72	parallel
Strand 5	E	138	141	parallel
Strand 6	E	165	169	parallel
Strand 7	E	36	41	parallel
Strand 8	E	193	197	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	247	248	first strand
Strand 2	E	366	369	parallel
Strand 3	E	281	290	parallel
Strand 4	E	270	278	anti-parallel
Strand 5	E	258	263	anti-parallel
Strand 6	E	320	325	parallel
Strand 7	E	343	345	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	100	first strand
Strand 2	F	105	110	anti-parallel
Strand 3	F	113	120	anti-parallel
Strand 4	F	67	71	parallel
Strand 5	F	138	142	parallel
Strand 6	F	165	169	parallel
Strand 7	F	36	41	parallel
Strand 8	F	193	197	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	247	248	first strand
Strand 2	F	366	369	parallel
Strand 3	F	281	290	parallel
Strand 4	F	270	278	anti-parallel
Strand 5	F	258	263	anti-parallel
Strand 6	F	320	325	parallel
Strand 7	F	343	345	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OEE

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OEE