Analysis of interatomic Contacts of Structural Units in PDB entry:
5OES

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OES entry

There are 3 chains in PDB entry 5OES (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 14	VAL 483
B	ASP 14	VAL 483
C	ILE 12	MET 371

There are114 helices in PDB entry 5OES. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	18	Right-handed 310
Helix 2	AA2	A	19	37	Right-handed alpha
Helix 3	AA3	A	71	94	Right-handed alpha
Helix 4	AA4	A	94	102	Right-handed alpha
Helix 5	AA5	A	102	109	Right-handed alpha
Helix 6	AA6	A	109	125	Right-handed alpha
Helix 7	AA7	A	161	179	Right-handed alpha
Helix 8	AA8	A	186	190	Right-handed 310
Helix 9	AA9	A	194	211	Right-handed alpha
Helix 10	AB1	A	227	243	Right-handed alpha
Helix 11	AB2	A	250	257	Right-handed alpha
Helix 12	AB3	A	283	287	Right-handed 310
Helix 13	AB4	A	289	302	Right-handed alpha
Helix 14	AB5	A	309	316	Right-handed alpha
Helix 15	AB6	A	317	325	Right-handed alpha
Helix 16	AB7	A	329	334	Right-handed alpha
Helix 17	AB8	A	336	347	Right-handed alpha
Helix 18	AB9	A	355	365	Right-handed alpha
Helix 19	AC1	A	384	394	Right-handed alpha
Helix 20	AC2	B	14	18	Right-handed 310
Helix 21	AC3	B	19	37	Right-handed alpha
Helix 22	AC4	B	71	94	Right-handed alpha
Helix 23	AC5	B	94	102	Right-handed alpha
Helix 24	AC6	B	102	109	Right-handed alpha
Helix 25	AC7	B	109	125	Right-handed alpha
Helix 26	AC8	B	161	179	Right-handed alpha
Helix 27	AC9	B	186	190	Right-handed 310
Helix 28	AD1	B	194	211	Right-handed alpha
Helix 29	AD2	B	227	243	Right-handed alpha
Helix 30	AD3	B	250	257	Right-handed alpha
Helix 31	AD4	B	283	287	Right-handed 310
Helix 32	AD5	B	289	302	Right-handed alpha
Helix 33	AD6	B	309	316	Right-handed alpha
Helix 34	AD7	B	317	325	Right-handed alpha
Helix 35	AD8	B	329	334	Right-handed alpha
Helix 36	AD9	B	336	347	Right-handed alpha
Helix 37	AE1	B	355	365	Right-handed alpha
Helix 38	AE2	B	384	395	Right-handed alpha
Helix 39	AE3	C	14	18	Right-handed 310
Helix 40	AE4	C	19	37	Right-handed alpha
Helix 41	AE5	C	70	94	Right-handed alpha
Helix 42	AE6	C	94	102	Right-handed alpha
Helix 43	AE7	C	102	109	Right-handed alpha
Helix 44	AE8	C	109	125	Right-handed alpha
Helix 45	AE9	C	161	179	Right-handed alpha
Helix 46	AF1	C	186	190	Right-handed 310
Helix 47	AF2	C	194	211	Right-handed alpha
Helix 48	AF3	C	227	243	Right-handed alpha
Helix 49	AF4	C	250	257	Right-handed alpha
Helix 50	AF5	C	283	287	Right-handed 310
Helix 51	AF6	C	289	302	Right-handed alpha
Helix 52	AF7	C	309	316	Right-handed alpha
Helix 53	AF8	C	317	325	Right-handed alpha
Helix 54	AF9	C	329	334	Right-handed alpha
Helix 55	AG1	C	336	347	Right-handed alpha
Helix 56	AG2	C	355	365	Right-handed alpha
Helix 57	AG3	C	384	394	Right-handed alpha
Helix 58	AG4	D	14	18	Right-handed 310
Helix 59	AG5	D	19	37	Right-handed alpha
Helix 60	AG6	D	71	94	Right-handed alpha
Helix 61	AG7	D	94	102	Right-handed alpha
Helix 62	AG8	D	102	109	Right-handed alpha
Helix 63	AG9	D	109	125	Right-handed alpha
Helix 64	AH1	D	161	179	Right-handed alpha
Helix 65	AH2	D	186	190	Right-handed 310
Helix 66	AH3	D	194	211	Right-handed alpha
Helix 67	AH4	D	227	243	Right-handed alpha
Helix 68	AH5	D	250	257	Right-handed alpha
Helix 69	AH6	D	283	287	Right-handed 310
Helix 70	AH7	D	289	302	Right-handed alpha
Helix 71	AH8	D	309	316	Right-handed alpha
Helix 72	AH9	D	317	325	Right-handed alpha
Helix 73	AI1	D	329	334	Right-handed alpha
Helix 74	AI2	D	336	347	Right-handed alpha
Helix 75	AI3	D	355	365	Right-handed alpha
Helix 76	AI4	D	384	394	Right-handed alpha
Helix 77	AI5	E	14	18	Right-handed 310
Helix 78	AI6	E	19	37	Right-handed alpha
Helix 79	AI7	E	70	94	Right-handed alpha
Helix 80	AI8	E	94	102	Right-handed alpha
Helix 81	AI9	E	102	109	Right-handed alpha
Helix 82	AJ1	E	109	125	Right-handed alpha
Helix 83	AJ2	E	161	179	Right-handed alpha
Helix 84	AJ3	E	186	190	Right-handed 310
Helix 85	AJ4	E	194	211	Right-handed alpha
Helix 86	AJ5	E	227	243	Right-handed alpha
Helix 87	AJ6	E	250	257	Right-handed alpha
Helix 88	AJ7	E	283	287	Right-handed 310
Helix 89	AJ8	E	289	302	Right-handed alpha
Helix 90	AJ9	E	309	316	Right-handed alpha
Helix 91	AK1	E	317	325	Right-handed alpha
Helix 92	AK2	E	329	334	Right-handed alpha
Helix 93	AK3	E	336	347	Right-handed alpha
Helix 94	AK4	E	355	365	Right-handed alpha
Helix 95	AK5	E	384	395	Right-handed alpha
Helix 96	AK6	F	14	18	Right-handed 310
Helix 97	AK7	F	19	37	Right-handed alpha
Helix 98	AK8	F	70	94	Right-handed alpha
Helix 99	AK9	F	94	102	Right-handed alpha
Helix 100	AL1	F	102	109	Right-handed alpha
Helix 101	AL2	F	109	125	Right-handed alpha
Helix 102	AL3	F	161	179	Right-handed alpha
Helix 103	AL4	F	186	190	Right-handed 310
Helix 104	AL5	F	194	211	Right-handed alpha
Helix 105	AL6	F	227	243	Right-handed alpha
Helix 106	AL7	F	250	257	Right-handed alpha
Helix 107	AL8	F	283	287	Right-handed 310
Helix 108	AL9	F	289	302	Right-handed alpha
Helix 109	AM1	F	309	316	Right-handed alpha
Helix 110	AM2	F	317	325	Right-handed alpha
Helix 111	AM3	F	329	334	Right-handed alpha
Helix 112	AM4	F	336	347	Right-handed alpha
Helix 113	AM5	F	355	365	Right-handed alpha
Helix 114	AM6	F	384	397	Right-handed alpha

There are 36 sheets in PDB entry 5OES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	57	59	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	149	155	first strand
Strand 2	A	132	142	anti-parallel
Strand 3	A	425	443	anti-parallel
Strand 4	A	448	462	anti-parallel
Strand 5	A	475	478	anti-parallel
Strand 6	A	62	63	parallel
Strand 7	A	416	422	anti-parallel
Strand 8	A	425	443	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	70	first strand
Strand 2	A	480	483	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	249	first strand
Strand 2	A	216	220	parallel
Strand 3	A	272	278	parallel
Strand 4	A	266	268	anti-parallel
Strand 5	A	258	260	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	246	249	first strand
Strand 2	A	216	220	parallel
Strand 3	A	272	278	parallel
Strand 4	A	305	307	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	352	first strand
Strand 2	A	406	409	anti-parallel
Strand 3	A	369	372	anti-parallel
Strand 4	A	382	383	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	42	first strand
Strand 2	B	57	59	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	155	first strand
Strand 2	B	132	142	anti-parallel
Strand 3	B	425	443	anti-parallel
Strand 4	B	448	462	anti-parallel
Strand 5	B	475	478	anti-parallel
Strand 6	B	62	63	parallel
Strand 7	B	416	422	anti-parallel
Strand 8	B	425	443	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	70	first strand
Strand 2	B	480	483	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	249	first strand
Strand 2	B	216	220	parallel
Strand 3	B	271	278	parallel
Strand 4	B	266	268	anti-parallel
Strand 5	B	258	260	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	246	249	first strand
Strand 2	B	216	220	parallel
Strand 3	B	271	278	parallel
Strand 4	B	305	307	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	352	first strand
Strand 2	B	406	409	anti-parallel
Strand 3	B	369	372	anti-parallel
Strand 4	B	382	383	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	57	59	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	155	first strand
Strand 2	C	132	142	anti-parallel
Strand 3	C	425	443	anti-parallel
Strand 4	C	448	462	anti-parallel
Strand 5	C	475	478	anti-parallel
Strand 6	C	62	63	parallel
Strand 7	C	416	422	anti-parallel
Strand 8	C	425	443	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	480	482	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	249	first strand
Strand 2	C	216	220	parallel
Strand 3	C	271	278	parallel
Strand 4	C	266	268	anti-parallel
Strand 5	C	258	260	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	249	first strand
Strand 2	C	216	220	parallel
Strand 3	C	271	278	parallel
Strand 4	C	305	307	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	352	first strand
Strand 2	C	406	409	anti-parallel
Strand 3	C	369	372	anti-parallel
Strand 4	C	382	383	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	57	59	anti-parallel

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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	155	first strand
Strand 2	D	132	142	anti-parallel
Strand 3	D	425	443	anti-parallel
Strand 4	D	448	462	anti-parallel
Strand 5	D	475	478	anti-parallel
Strand 6	D	62	63	parallel
Strand 7	D	416	422	anti-parallel
Strand 8	D	425	443	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	70	first strand
Strand 2	D	480	483	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	246	249	first strand
Strand 2	D	216	220	parallel
Strand 3	D	271	278	parallel
Strand 4	D	266	268	anti-parallel
Strand 5	D	258	260	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	246	249	first strand
Strand 2	D	216	220	parallel
Strand 3	D	271	278	parallel
Strand 4	D	305	307	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	352	first strand
Strand 2	D	406	409	anti-parallel
Strand 3	D	369	372	anti-parallel
Strand 4	D	382	383	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	40	42	first strand
Strand 2	E	57	59	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	155	first strand
Strand 2	E	132	142	anti-parallel
Strand 3	E	425	443	anti-parallel
Strand 4	E	448	462	anti-parallel
Strand 5	E	475	478	anti-parallel
Strand 6	E	62	63	parallel
Strand 7	E	416	422	anti-parallel
Strand 8	E	425	443	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	67	69	first strand
Strand 2	E	480	482	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	246	249	first strand
Strand 2	E	216	220	parallel
Strand 3	E	272	278	parallel
Strand 4	E	266	268	anti-parallel
Strand 5	E	258	260	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	246	249	first strand
Strand 2	E	216	220	parallel
Strand 3	E	272	278	parallel
Strand 4	E	305	307	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	352	first strand
Strand 2	E	406	409	anti-parallel
Strand 3	E	369	372	anti-parallel
Strand 4	E	382	383	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	42	first strand
Strand 2	F	57	59	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	155	first strand
Strand 2	F	132	142	anti-parallel
Strand 3	F	425	443	anti-parallel
Strand 4	F	448	462	anti-parallel
Strand 5	F	475	478	anti-parallel
Strand 6	F	62	63	parallel
Strand 7	F	416	422	anti-parallel
Strand 8	F	425	443	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	67	69	first strand
Strand 2	F	480	482	parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	246	249	first strand
Strand 2	F	216	220	parallel
Strand 3	F	271	278	parallel
Strand 4	F	266	268	anti-parallel
Strand 5	F	258	260	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	246	249	first strand
Strand 2	F	216	220	parallel
Strand 3	F	271	278	parallel
Strand 4	F	305	307	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	350	352	first strand
Strand 2	F	406	409	anti-parallel
Strand 3	F	369	372	anti-parallel
Strand 4	F	382	383	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OES

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OES