Analysis of interatomic Contacts of Structural Units in PDB entry:
5OET

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OET entry

There are 2 chains in PDB entry 5OET (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLN 34	VAL 525
A	GLN 34	VAL 525

There are 31 helices in PDB entry 5OET. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	43	60	Right-handed alpha
Helix 2	AA2	B	98	120	Right-handed alpha
Helix 3	AA3	B	121	128	Right-handed alpha
Helix 4	AA4	B	141	151	Right-handed alpha
Helix 5	AA5	B	195	211	Right-handed alpha
Helix 6	AA6	B	224	241	Right-handed alpha
Helix 7	AA7	B	258	271	Right-handed alpha
Helix 8	AA8	B	286	290	Right-handed alpha
Helix 9	AA9	B	325	332	Right-handed alpha
Helix 10	AB1	B	341	346	Right-handed alpha
Helix 11	AB2	B	348	355	Right-handed alpha
Helix 12	AB3	B	361	365	Right-handed 310
Helix 13	AB4	B	373	381	Right-handed alpha
Helix 14	AB5	B	404	406	Right-handed 310
Helix 15	AB6	B	426	435	Right-handed alpha
Helix 16	AB7	B	436	441	Right-handed alpha
Helix 17	AB8	A	43	60	Right-handed alpha
Helix 18	AB9	A	98	120	Right-handed alpha
Helix 19	AC1	A	121	128	Right-handed alpha
Helix 20	AC2	A	143	148	Right-handed alpha
Helix 21	AC3	A	195	211	Right-handed alpha
Helix 22	AC4	A	224	241	Right-handed alpha
Helix 23	AC5	A	258	272	Right-handed alpha
Helix 24	AC6	A	286	290	Right-handed alpha
Helix 25	AC7	A	325	332	Right-handed alpha
Helix 26	AC8	A	341	346	Right-handed alpha
Helix 27	AC9	A	348	355	Right-handed alpha
Helix 28	AD1	A	361	365	Right-handed 310
Helix 29	AD2	A	373	381	Right-handed alpha
Helix 30	AD3	A	426	435	Right-handed alpha
Helix 31	AD4	A	436	441	Right-handed alpha

There are 16 sheets in PDB entry 5OET. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	83	86	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	94	97	first strand
Strand 2	B	522	525	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	520	first strand
Strand 2	B	497	504	anti-parallel
Strand 3	B	471	484	anti-parallel
Strand 4	B	160	173	anti-parallel
Strand 5	B	179	188	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	283	first strand
Strand 2	B	246	251	parallel
Strand 3	B	308	314	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	293	first strand
Strand 2	B	300	302	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	386	first strand
Strand 2	B	443	447	anti-parallel
Strand 3	B	408	412	anti-parallel
Strand 4	B	422	424	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	456	first strand
Strand 2	B	469	471	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	484	first strand
Strand 2	B	489	493	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	67	first strand
Strand 2	A	83	86	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	97	first strand
Strand 2	A	522	525	parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	520	first strand
Strand 2	A	497	504	anti-parallel
Strand 3	A	471	484	anti-parallel
Strand 4	A	160	173	anti-parallel
Strand 5	A	179	188	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	283	first strand
Strand 2	A	246	251	parallel
Strand 3	A	308	314	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	293	first strand
Strand 2	A	300	302	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	386	first strand
Strand 2	A	443	447	anti-parallel
Strand 3	A	408	412	anti-parallel
Strand 4	A	422	424	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	454	456	first strand
Strand 2	A	469	471	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	481	484	first strand
Strand 2	A	489	493	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OET

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OET