Analysis of interatomic Contacts of Structural Units in PDB entry:
5OFO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OFO entry

There are 6 chains in PDB entry 5OFO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	LEU 161	GLN 857
F	LEU 161	GLN 857
E	LEU 161	GLN 857
D	LEU 161	GLN 857
B	LEU 161	GLN 857
A	LEU 161	GLN 857

There are197 helices in PDB entry 5OFO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	168	174	Right-handed alpha
Helix 2	AA2	C	183	195	Right-handed alpha
Helix 3	AA3	C	211	225	Right-handed alpha
Helix 4	AA4	C	253	268	Right-handed alpha
Helix 5	AA5	C	279	283	Right-handed 310
Helix 6	AA6	C	299	305	Right-handed alpha
Helix 7	AA7	C	316	324	Right-handed alpha
Helix 8	AA8	C	326	332	Right-handed alpha
Helix 9	AA9	C	342	362	Right-handed alpha
Helix 10	AB1	C	366	381	Right-handed alpha
Helix 11	AB2	C	387	407	Right-handed alpha
Helix 12	AB3	C	409	429	Right-handed alpha
Helix 13	AB4	C	441	493	Right-handed alpha
Helix 14	AB5	C	494	503	Right-handed alpha
Helix 15	AB6	C	504	524	Right-handed alpha
Helix 16	AB7	C	532	545	Right-handed alpha
Helix 17	AB8	C	554	561	Right-handed alpha
Helix 18	AB9	C	561	570	Right-handed alpha
Helix 19	AC1	C	573	590	Right-handed alpha
Helix 20	AC2	C	610	623	Right-handed alpha
Helix 21	AC3	C	640	647	Right-handed alpha
Helix 22	AC4	C	653	659	Right-handed alpha
Helix 23	AC5	C	660	669	Right-handed alpha
Helix 24	AC6	C	679	682	Right-handed 310
Helix 25	AC7	C	683	696	Right-handed alpha
Helix 26	AC8	C	721	729	Right-handed alpha
Helix 27	AC9	C	733	749	Right-handed alpha
Helix 28	AD1	C	750	757	Right-handed alpha
Helix 29	AD2	C	767	789	Right-handed alpha
Helix 30	AD3	C	796	808	Right-handed alpha
Helix 31	AD4	C	815	835	Right-handed alpha
Helix 32	AD5	F	168	174	Right-handed alpha
Helix 33	AD6	F	183	195	Right-handed alpha
Helix 34	AD7	F	211	225	Right-handed alpha
Helix 35	AD8	F	229	233	Right-handed 310
Helix 36	AD9	F	241	246	Right-handed alpha
Helix 37	AE1	F	253	268	Right-handed alpha
Helix 38	AE2	F	299	306	Right-handed alpha
Helix 39	AE3	F	315	321	Right-handed alpha
Helix 40	AE4	F	326	331	Right-handed alpha
Helix 41	AE5	F	342	361	Right-handed alpha
Helix 42	AE6	F	366	381	Right-handed alpha
Helix 43	AE7	F	387	407	Right-handed alpha
Helix 44	AE8	F	409	431	Right-handed alpha
Helix 45	AE9	F	437	440	Right-handed 310
Helix 46	AF1	F	441	493	Right-handed alpha
Helix 47	AF2	F	494	503	Right-handed alpha
Helix 48	AF3	F	504	524	Right-handed alpha
Helix 49	AF4	F	532	544	Right-handed alpha
Helix 50	AF5	F	547	553	Right-handed alpha
Helix 51	AF6	F	554	561	Right-handed alpha
Helix 52	AF7	F	561	570	Right-handed alpha
Helix 53	AF8	F	573	590	Right-handed alpha
Helix 54	AF9	F	610	623	Right-handed alpha
Helix 55	AG1	F	640	647	Right-handed alpha
Helix 56	AG2	F	660	669	Right-handed alpha
Helix 57	AG3	F	678	682	Right-handed 310
Helix 58	AG4	F	683	695	Right-handed alpha
Helix 59	AG5	F	718	720	Right-handed 310
Helix 60	AG6	F	721	728	Right-handed alpha
Helix 61	AG7	F	734	749	Right-handed alpha
Helix 62	AG8	F	750	757	Right-handed alpha
Helix 63	AG9	F	767	788	Right-handed alpha
Helix 64	AH1	F	796	807	Right-handed alpha
Helix 65	AH2	F	814	825	Right-handed alpha
Helix 66	AH3	F	825	834	Right-handed alpha
Helix 67	AH4	E	168	174	Right-handed alpha
Helix 68	AH5	E	183	195	Right-handed alpha
Helix 69	AH6	E	211	225	Right-handed alpha
Helix 70	AH7	E	253	268	Right-handed alpha
Helix 71	AH8	E	298	306	Right-handed alpha
Helix 72	AH9	E	315	324	Right-handed alpha
Helix 73	AI1	E	326	331	Right-handed alpha
Helix 74	AI2	E	342	362	Right-handed alpha
Helix 75	AI3	E	366	381	Right-handed alpha
Helix 76	AI4	E	387	407	Right-handed alpha
Helix 77	AI5	E	409	431	Right-handed alpha
Helix 78	AI6	E	441	493	Right-handed alpha
Helix 79	AI7	E	494	503	Right-handed alpha
Helix 80	AI8	E	505	524	Right-handed alpha
Helix 81	AI9	E	533	544	Right-handed alpha
Helix 82	AJ1	E	548	553	Right-handed alpha
Helix 83	AJ2	E	554	561	Right-handed alpha
Helix 84	AJ3	E	561	570	Right-handed alpha
Helix 85	AJ4	E	573	589	Right-handed alpha
Helix 86	AJ5	E	610	623	Right-handed alpha
Helix 87	AJ6	E	641	647	Right-handed alpha
Helix 88	AJ7	E	653	659	Right-handed alpha
Helix 89	AJ8	E	660	669	Right-handed alpha
Helix 90	AJ9	E	679	682	Right-handed 310
Helix 91	AK1	E	683	696	Right-handed alpha
Helix 92	AK2	E	721	729	Right-handed alpha
Helix 93	AK3	E	733	749	Right-handed alpha
Helix 94	AK4	E	750	755	Right-handed alpha
Helix 95	AK5	E	767	786	Right-handed alpha
Helix 96	AK6	E	787	790	Right-handed 310
Helix 97	AK7	E	796	807	Right-handed alpha
Helix 98	AK8	E	815	825	Right-handed alpha
Helix 99	AK9	E	825	836	Right-handed alpha
Helix 100	AL1	D	168	174	Right-handed alpha
Helix 101	AL2	D	184	195	Right-handed alpha
Helix 102	AL3	D	211	225	Right-handed alpha
Helix 103	AL4	D	241	246	Right-handed alpha
Helix 104	AL5	D	253	270	Right-handed alpha
Helix 105	AL6	D	280	283	Right-handed 310
Helix 106	AL7	D	299	306	Right-handed alpha
Helix 107	AL8	D	315	322	Right-handed alpha
Helix 108	AL9	D	326	331	Right-handed alpha
Helix 109	AM1	D	342	361	Right-handed alpha
Helix 110	AM2	D	366	380	Right-handed alpha
Helix 111	AM3	D	387	407	Right-handed alpha
Helix 112	AM4	D	409	430	Right-handed alpha
Helix 113	AM5	D	434	439	Right-handed alpha
Helix 114	AM6	D	441	493	Right-handed alpha
Helix 115	AM7	D	494	503	Right-handed alpha
Helix 116	AM8	D	504	524	Right-handed alpha
Helix 117	AM9	D	532	542	Right-handed alpha
Helix 118	AN1	D	549	553	Right-handed 310
Helix 119	AN2	D	555	561	Right-handed alpha
Helix 120	AN3	D	561	570	Right-handed alpha
Helix 121	AN4	D	573	590	Right-handed alpha
Helix 122	AN5	D	610	623	Right-handed alpha
Helix 123	AN6	D	641	647	Right-handed alpha
Helix 124	AN7	D	655	659	Right-handed 310
Helix 125	AN8	D	660	669	Right-handed alpha
Helix 126	AN9	D	679	682	Right-handed 310
Helix 127	AO1	D	683	695	Right-handed alpha
Helix 128	AO2	D	733	749	Right-handed alpha
Helix 129	AO3	D	750	756	Right-handed alpha
Helix 130	AO4	D	767	790	Right-handed alpha
Helix 131	AO5	D	796	808	Right-handed alpha
Helix 132	AO6	D	816	835	Right-handed alpha
Helix 133	AO7	B	168	174	Right-handed alpha
Helix 134	AO8	B	183	195	Right-handed alpha
Helix 135	AO9	B	207	210	Right-handed 310
Helix 136	AP1	B	211	225	Right-handed alpha
Helix 137	AP2	B	242	247	Right-handed alpha
Helix 138	AP3	B	254	270	Right-handed alpha
Helix 139	AP4	B	298	305	Right-handed alpha
Helix 140	AP5	B	315	321	Right-handed alpha
Helix 141	AP6	B	326	333	Right-handed alpha
Helix 142	AP7	B	343	362	Right-handed alpha
Helix 143	AP8	B	366	381	Right-handed alpha
Helix 144	AP9	B	387	407	Right-handed alpha
Helix 145	AQ1	B	409	430	Right-handed alpha
Helix 146	AQ2	B	434	439	Right-handed alpha
Helix 147	AQ3	B	441	493	Right-handed alpha
Helix 148	AQ4	B	494	503	Right-handed alpha
Helix 149	AQ5	B	504	524	Right-handed alpha
Helix 150	AQ6	B	532	544	Right-handed alpha
Helix 151	AQ7	B	554	561	Right-handed alpha
Helix 152	AQ8	B	561	570	Right-handed alpha
Helix 153	AQ9	B	573	589	Right-handed alpha
Helix 154	AR1	B	610	623	Right-handed alpha
Helix 155	AR2	B	640	647	Right-handed alpha
Helix 156	AR3	B	660	669	Right-handed alpha
Helix 157	AR4	B	678	682	Right-handed 310
Helix 158	AR5	B	683	695	Right-handed alpha
Helix 159	AR6	B	721	728	Right-handed alpha
Helix 160	AR7	B	733	748	Right-handed alpha
Helix 161	AR8	B	750	756	Right-handed alpha
Helix 162	AR9	B	767	788	Right-handed alpha
Helix 163	AS1	B	796	806	Right-handed alpha
Helix 164	AS2	B	814	835	Right-handed alpha
Helix 165	AS3	A	168	174	Right-handed alpha
Helix 166	AS4	A	183	195	Right-handed alpha
Helix 167	AS5	A	211	225	Right-handed alpha
Helix 168	AS6	A	253	270	Right-handed alpha
Helix 169	AS7	A	298	306	Right-handed alpha
Helix 170	AS8	A	315	324	Right-handed alpha
Helix 171	AS9	A	326	332	Right-handed alpha
Helix 172	AT1	A	342	362	Right-handed alpha
Helix 173	AT2	A	366	381	Right-handed alpha
Helix 174	AT3	A	387	407	Right-handed alpha
Helix 175	AT4	A	409	429	Right-handed alpha
Helix 176	AT5	A	436	440	Right-handed 310
Helix 177	AT6	A	441	493	Right-handed alpha
Helix 178	AT7	A	494	503	Right-handed alpha
Helix 179	AT8	A	505	524	Right-handed alpha
Helix 180	AT9	A	532	545	Right-handed alpha
Helix 181	AU1	A	547	553	Right-handed alpha
Helix 182	AU2	A	554	570	Right-handed alpha
Helix 183	AU3	A	573	590	Right-handed alpha
Helix 184	AU4	A	610	620	Right-handed alpha
Helix 185	AU5	A	625	627	Right-handed 310
Helix 186	AU6	A	641	647	Right-handed alpha
Helix 187	AU7	A	654	659	Right-handed alpha
Helix 188	AU8	A	660	669	Right-handed alpha
Helix 189	AU9	A	678	682	Right-handed 310
Helix 190	AV1	A	683	696	Right-handed alpha
Helix 191	AV2	A	724	729	Right-handed alpha
Helix 192	AV3	A	733	749	Right-handed alpha
Helix 193	AV4	A	750	757	Right-handed alpha
Helix 194	AV5	A	767	790	Right-handed alpha
Helix 195	AV6	A	796	807	Right-handed alpha
Helix 196	AV7	A	816	825	Right-handed alpha
Helix 197	AV8	A	825	834	Right-handed alpha

There are 28 sheets in PDB entry 5OFO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	167	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	274	277	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	312	315	first strand
Strand 2	C	201	206	parallel
Strand 3	C	333	337	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	629	633	first strand
Strand 2	C	673	677	parallel
Strand 3	C	713	717	parallel
Strand 4	C	599	604	parallel
Strand 5	C	759	762	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	698	700	first strand
Strand 2	C	706	708	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	793	795	first strand
Strand 2	C	844	847	parallel
Strand 3	C	854	856	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	165	167	first strand
Strand 2	F	236	240	anti-parallel
Strand 3	F	273	278	parallel
Strand 4	F	310	314	parallel
Strand 5	F	201	205	parallel
Strand 6	F	333	337	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	364	365	first strand
Strand 2	F	530	531	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	599	600	first strand
Strand 2	F	713	716	parallel
Strand 3	F	673	677	parallel
Strand 4	F	629	633	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	602	604	first strand
Strand 2	F	760	762	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	698	700	first strand
Strand 2	F	706	708	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	792	795	first strand
Strand 2	F	843	846	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	167	first strand
Strand 2	E	236	239	anti-parallel
Strand 3	E	273	276	parallel
Strand 4	E	310	314	parallel
Strand 5	E	201	206	parallel
Strand 6	E	333	338	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	630	633	first strand
Strand 2	E	673	677	parallel
Strand 3	E	713	717	parallel
Strand 4	E	599	604	parallel
Strand 5	E	759	762	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	698	700	first strand
Strand 2	E	706	708	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	792	795	first strand
Strand 2	E	843	848	parallel
Strand 3	E	853	856	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	239	first strand
Strand 2	D	273	278	parallel
Strand 3	D	310	314	parallel
Strand 4	D	201	205	parallel
Strand 5	D	333	337	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	364	365	first strand
Strand 2	D	530	531	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	630	633	first strand
Strand 2	D	673	677	parallel
Strand 3	D	713	717	parallel
Strand 4	D	600	604	parallel
Strand 5	D	759	762	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	698	700	first strand
Strand 2	D	706	708	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	793	795	first strand
Strand 2	D	844	847	parallel
Strand 3	D	854	856	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	167	first strand
Strand 2	B	236	239	anti-parallel
Strand 3	B	273	278	parallel
Strand 4	B	310	314	parallel
Strand 5	B	202	205	parallel
Strand 6	B	334	337	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	364	365	first strand
Strand 2	B	530	531	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	629	632	first strand
Strand 2	B	672	676	parallel
Strand 3	B	712	717	parallel
Strand 4	B	600	604	parallel
Strand 5	B	759	762	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	700	first strand
Strand 2	B	706	708	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	793	794	first strand
Strand 2	B	844	848	parallel
Strand 3	B	853	856	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	167	first strand
Strand 2	A	236	240	anti-parallel
Strand 3	A	273	276	parallel
Strand 4	A	310	314	parallel
Strand 5	A	201	205	parallel
Strand 6	A	333	337	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	629	633	first strand
Strand 2	A	672	677	parallel
Strand 3	A	712	717	parallel
Strand 4	A	599	604	parallel
Strand 5	A	759	762	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	700	first strand
Strand 2	A	706	708	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OFO

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OFO