Analysis of interatomic Contacts of Structural Units in PDB entry:
5OHG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5OHG entry

There are 6 chains in PDB entry 5OHG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 431
B	MET 1	ALA 432
C	ARG 813	ILE 848
H	MET 1	GLN 431
I	MET 1	GLN 431
J	ARG 816	ARG 850

There are 84 helices in PDB entry 5OHG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	58	62	Right-handed 310
Helix 2	AA2	A	64	73	Right-handed alpha
Helix 3	AA3	A	73	80	Right-handed alpha
Helix 4	AA4	A	86	99	Right-handed alpha
Helix 5	AA5	A	107	126	Right-handed alpha
Helix 6	AA6	A	129	138	Right-handed alpha
Helix 7	AA7	A	157	160	Right-handed 310
Helix 8	AA8	A	178	200	Right-handed alpha
Helix 9	AA9	A	220	233	Right-handed alpha
Helix 10	AB1	A	248	251	Right-handed 310
Helix 11	AB2	A	261	264	Right-handed 310
Helix 12	AB3	A	269	284	Right-handed alpha
Helix 13	AB4	A	297	309	Right-handed alpha
Helix 14	AB5	A	323	333	Right-handed alpha
Helix 15	AB6	A	342	347	Right-handed alpha
Helix 16	AB7	A	348	362	Right-handed alpha
Helix 17	AB8	A	378	387	Right-handed alpha
Helix 18	AB9	A	399	417	Right-handed alpha
Helix 19	AC1	A	418	420	Right-handed 310
Helix 20	AC2	A	423	428	Right-handed 310
Helix 21	AC3	B	58	62	Right-handed 310
Helix 22	AC4	B	64	73	Right-handed alpha
Helix 23	AC5	B	73	80	Right-handed alpha
Helix 24	AC6	B	86	99	Right-handed alpha
Helix 25	AC7	B	107	126	Right-handed alpha
Helix 26	AC8	B	129	138	Right-handed alpha
Helix 27	AC9	B	157	160	Right-handed 310
Helix 28	AD1	B	178	200	Right-handed alpha
Helix 29	AD2	B	220	233	Right-handed alpha
Helix 30	AD3	B	248	251	Right-handed 310
Helix 31	AD4	B	261	264	Right-handed 310
Helix 32	AD5	B	269	284	Right-handed alpha
Helix 33	AD6	B	297	309	Right-handed alpha
Helix 34	AD7	B	323	333	Right-handed alpha
Helix 35	AD8	B	342	346	Right-handed 310
Helix 36	AD9	B	348	362	Right-handed alpha
Helix 37	AE1	B	378	387	Right-handed alpha
Helix 38	AE2	B	399	417	Right-handed alpha
Helix 39	AE3	B	418	420	Right-handed 310
Helix 40	AE4	B	423	428	Right-handed 310
Helix 41	AE5	C	830	833	Right-handed 310
Helix 42	AE6	C	834	840	Right-handed alpha
Helix 43	AE7	H	58	62	Right-handed 310
Helix 44	AE8	H	64	73	Right-handed alpha
Helix 45	AE9	H	73	80	Right-handed alpha
Helix 46	AF1	H	86	99	Right-handed alpha
Helix 47	AF2	H	107	126	Right-handed alpha
Helix 48	AF3	H	129	138	Right-handed alpha
Helix 49	AF4	H	157	160	Right-handed 310
Helix 50	AF5	H	178	200	Right-handed alpha
Helix 51	AF6	H	220	233	Right-handed alpha
Helix 52	AF7	H	248	251	Right-handed 310
Helix 53	AF8	H	261	264	Right-handed 310
Helix 54	AF9	H	269	284	Right-handed alpha
Helix 55	AG1	H	297	309	Right-handed alpha
Helix 56	AG2	H	323	333	Right-handed alpha
Helix 57	AG3	H	342	347	Right-handed alpha
Helix 58	AG4	H	348	362	Right-handed alpha
Helix 59	AG5	H	378	387	Right-handed alpha
Helix 60	AG6	H	399	417	Right-handed alpha
Helix 61	AG7	H	418	420	Right-handed 310
Helix 62	AG8	H	423	428	Right-handed 310
Helix 63	AG9	I	58	62	Right-handed 310
Helix 64	AH1	I	64	73	Right-handed alpha
Helix 65	AH2	I	73	80	Right-handed alpha
Helix 66	AH3	I	86	99	Right-handed alpha
Helix 67	AH4	I	107	126	Right-handed alpha
Helix 68	AH5	I	129	138	Right-handed alpha
Helix 69	AH6	I	157	160	Right-handed 310
Helix 70	AH7	I	178	200	Right-handed alpha
Helix 71	AH8	I	220	233	Right-handed alpha
Helix 72	AH9	I	248	253	Right-handed 310
Helix 73	AI1	I	261	264	Right-handed 310
Helix 74	AI2	I	269	284	Right-handed alpha
Helix 75	AI3	I	297	309	Right-handed alpha
Helix 76	AI4	I	323	333	Right-handed alpha
Helix 77	AI5	I	342	347	Right-handed alpha
Helix 78	AI6	I	348	362	Right-handed alpha
Helix 79	AI7	I	378	387	Right-handed alpha
Helix 80	AI8	I	399	417	Right-handed alpha
Helix 81	AI9	I	418	420	Right-handed 310
Helix 82	AJ1	I	423	428	Right-handed 310
Helix 83	AJ2	J	830	833	Right-handed 310
Helix 84	AJ3	J	834	839	Right-handed alpha

There are 12 sheets in PDB entry 5OHG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	13	first strand
Strand 2	A	19	27	anti-parallel
Strand 3	A	32	36	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	155	first strand
Strand 2	A	168	172	anti-parallel
Strand 3	A	242	246	anti-parallel
Strand 4	A	286	290	parallel
Strand 5	A	313	316	parallel
Strand 6	A	338	341	parallel
Strand 7	A	365	369	parallel
Strand 8	A	391	393	parallel
Strand 9	A	148	155	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	254	first strand
Strand 2	A	257	260	anti-parallel
Strand 3	A	266	268	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	13	first strand
Strand 2	B	19	27	anti-parallel
Strand 3	B	32	36	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	390	393	parallel
Strand 3	B	365	369	parallel
Strand 4	B	338	341	parallel
Strand 5	B	313	316	parallel
Strand 6	B	286	290	parallel
Strand 7	B	242	246	parallel
Strand 8	B	168	172	anti-parallel
Strand 9	B	151	155	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	254	first strand
Strand 2	B	257	260	anti-parallel
Strand 3	B	266	268	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	13	first strand
Strand 2	H	19	27	anti-parallel
Strand 3	H	32	36	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	148	155	first strand
Strand 2	H	168	172	anti-parallel
Strand 3	H	242	246	anti-parallel
Strand 4	H	286	290	parallel
Strand 5	H	313	316	parallel
Strand 6	H	338	341	parallel
Strand 7	H	365	369	parallel
Strand 8	H	390	393	parallel
Strand 9	H	148	155	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	253	254	first strand
Strand 2	H	257	260	anti-parallel
Strand 3	H	266	268	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	13	first strand
Strand 2	I	19	27	anti-parallel
Strand 3	I	32	36	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	148	149	first strand
Strand 2	I	390	393	parallel
Strand 3	I	365	369	parallel
Strand 4	I	338	341	parallel
Strand 5	I	313	316	parallel
Strand 6	I	286	290	parallel
Strand 7	I	242	246	parallel
Strand 8	I	168	172	anti-parallel
Strand 9	I	151	155	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	258	260	first strand
Strand 2	I	266	268	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5OHG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5OHG