Analysis of interatomic Contacts of Structural Units in PDB entry:
5OHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OHJ entry

There are 2 chains in PDB entry 5OHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 323GLN 658
B
 SER 324GLN 658
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 5OHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
323 328Right-handed alpha
Helix 2
AA2
A
334 343Right-handed alpha
Helix 3
AA3
A
351 359Right-handed alpha
Helix 4
AA4
A
362 375Right-handed alpha
Helix 5
AA5
A
376 382Right-handed alpha
Helix 6
AA6
A
384 398Right-handed alpha
Helix 7
AA7
A
407 423Right-handed alpha
Helix 8
AA8
A
424 428Right-handed 310
Helix 9
AA9
A
432 446Right-handed alpha
Helix 10
AB1
A
454 461Right-handed alpha
Helix 11
AB2
A
463 469Right-handed alpha
Helix 12
AB3
A
473 486Right-handed alpha
Helix 13
AB4
A
487 489Right-handed 310
Helix 14
AB5
A
499 516Right-handed alpha
Helix 15
AB6
A
517 520Right-handed 310
Helix 16
AB7
A
521 535Right-handed alpha
Helix 17
AB8
A
548 565Right-handed alpha
Helix 18
AB9
A
566 570Right-handed 310
Helix 19
AC1
A
571 596Right-handed alpha
Helix 20
AC2
A
610 622Right-handed alpha
Helix 21
AC3
A
622 634Right-handed alpha
Helix 22
AC4
A
638 655Right-handed alpha
Helix 23
AC5
B
325 329Right-handed alpha
Helix 24
AC6
B
334 343Right-handed alpha
Helix 25
AC7
B
351 358Right-handed alpha
Helix 26
AC8
B
362 375Right-handed alpha
Helix 27
AC9
B
376 381Right-handed alpha
Helix 28
AD1
B
384 398Right-handed alpha
Helix 29
AD2
B
407 423Right-handed alpha
Helix 30
AD3
B
424 428Right-handed 310
Helix 31
AD4
B
432 446Right-handed alpha
Helix 32
AD5
B
454 461Right-handed alpha
Helix 33
AD6
B
463 469Right-handed alpha
Helix 34
AD7
B
473 486Right-handed alpha
Helix 35
AD8
B
487 489Right-handed 310
Helix 36
AD9
B
499 516Right-handed alpha
Helix 37
AE1
B
517 520Right-handed 310
Helix 38
AE2
B
521 535Right-handed alpha
Helix 39
AE3
B
548 565Right-handed alpha
Helix 40
AE4
B
566 570Right-handed 310
Helix 41
AE5
B
571 597Right-handed alpha
Helix 42
AE6
B
605 609Right-handed 310
Helix 43
AE7
B
610 622Right-handed alpha
Helix 44
AE8
B
622 634Right-handed alpha
Helix 45
AE9
B
638 655Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5OHJ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
544 545anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il