Analysis of interatomic Contacts of Structural Units in PDB entry:
5OHX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OHX entry

There are 2 chains in PDB entry 5OHX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5ASN 495
B
 GLN 5ASN 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5OHX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 43Right-handed 310
Helix 2
AA2
A
52 58Right-handed alpha
Helix 3
AA3
A
77 92Right-handed alpha
Helix 4
AA4
A
107 121Right-handed alpha
Helix 5
AA5
A
135 143Right-handed alpha
Helix 6
AA6
A
161 173Right-handed alpha
Helix 7
AA7
A
185 194Right-handed alpha
Helix 8
AA8
A
194 203Right-handed alpha
Helix 9
AA9
A
217 231Right-handed alpha
Helix 10
AB1
A
285 301Right-handed alpha
Helix 11
AB2
A
305 319Right-handed alpha
Helix 12
AB3
A
320 322Right-handed 310
Helix 13
AB4
A
345 352Right-handed alpha
Helix 14
AB5
A
361 367Right-handed 310
Helix 15
AB6
A
371 375Right-handed 310
Helix 16
AB7
A
389 400Right-handed alpha
Helix 17
AB8
A
419 430Right-handed alpha
Helix 18
AB9
A
437 442Right-handed 310
Helix 19
AC1
A
454 462Right-handed alpha
Helix 20
AC2
A
484 494Right-handed alpha
Helix 21
AC3
B
38 43Right-handed 310
Helix 22
AC4
B
52 58Right-handed alpha
Helix 23
AC5
B
77 92Right-handed alpha
Helix 24
AC6
B
107 121Right-handed alpha
Helix 25
AC7
B
135 143Right-handed alpha
Helix 26
AC8
B
161 173Right-handed alpha
Helix 27
AC9
B
185 194Right-handed alpha
Helix 28
AD1
B
194 203Right-handed alpha
Helix 29
AD2
B
217 231Right-handed alpha
Helix 30
AD3
B
285 301Right-handed alpha
Helix 31
AD4
B
305 319Right-handed alpha
Helix 32
AD5
B
335 340Right-handed 310
Helix 33
AD6
B
345 352Right-handed alpha
Helix 34
AD7
B
361 366Right-handed 310
Helix 35
AD8
B
371 375Right-handed 310
Helix 36
AD9
B
389 400Right-handed alpha
Helix 37
AE1
B
419 430Right-handed alpha
Helix 38
AE2
B
437 442Right-handed 310
Helix 39
AE3
B
454 462Right-handed alpha
Helix 40
AE4
B
484 494Right-handed alpha
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There are 8 sheets in PDB entry 5OHX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
63 68anti-parallel
Strand 3
A
327 332parallel
Strand 4
A
209 213parallel
Strand 5
A
235 241parallel
Strand 6
A
280 284parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
123 127parallel
Strand 3
A
100 103parallel
Strand 4
A
176 178parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 407first strand
Strand 2
A
416 418anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 450first strand
Strand 2
A
468 472parallel
Strand 3
A
478 483anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
63 68anti-parallel
Strand 3
B
327 332parallel
Strand 4
B
209 213parallel
Strand 5
B
235 241parallel
Strand 6
B
280 284parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 148first strand
Strand 2
B
123 127parallel
Strand 3
B
100 103parallel
Strand 4
B
176 178parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 407first strand
Strand 2
B
416 418anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
448 450first strand
Strand 2
B
468 472parallel
Strand 3
B
478 483anti-parallel
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