Analysis of interatomic Contacts of Structural Units in PDB entry:
5OIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OIZ entry

There is 1 chain in PDB entry 5OIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 71ASP 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 5OIZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 131Right-handed alpha
Helix 2
AA2
A
133 142Right-handed alpha
Helix 3
AA3
A
160 173Right-handed alpha
Helix 4
AA4
A
194 199Right-handed alpha
Helix 5
AA5
A
217 229Right-handed alpha
Helix 6
AA6
A
266 285Right-handed alpha
Helix 7
AA7
A
335 338Right-handed 310
Helix 8
AA8
A
339 351Right-handed alpha
Helix 9
AA9
A
373 379Right-handed alpha
Helix 10
AB1
A
388 393Right-handed alpha
Helix 11
AB2
A
396 408Right-handed alpha
Helix 12
AB3
A
408 419Right-handed alpha
Helix 13
AB4
A
441 448Right-handed alpha
Helix 14
AB5
A
449 451Right-handed 310
Helix 15
AB6
A
457 470Right-handed alpha
Helix 16
AB7
A
504 521Right-handed alpha
Helix 17
AB8
A
596 614Right-handed alpha
Helix 18
AB9
A
645 656Right-handed alpha
Helix 19
AC1
A
703 713Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 5OIZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
178 187anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
79 80anti-parallel
Strand 4
A
260 263parallel
Strand 5
A
480 485anti-parallel
Strand 6
A
490 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 205first strand
Strand 2
A
211 215anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 307first strand
Strand 2
A
289 295anti-parallel
Strand 3
A
583 590anti-parallel
Strand 4
A
574 576anti-parallel
Strand 5
A
545 546anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 307first strand
Strand 2
A
289 295anti-parallel
Strand 3
A
583 590anti-parallel
Strand 4
A
569 572anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
385 387anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
370 371anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 475first strand
Strand 2
A
498 500anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
528 529first strand
Strand 2
A
534 535anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
661 663first strand
Strand 2
A
687 689parallel
Strand 3
A
671 672anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 721first strand
Strand 2
A
743 749parallel
Strand 3
A
726 730anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il