Analysis of interatomic Contacts of Structural Units in PDB entry:
5OJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OJ0 entry

There is 1 chain in PDB entry 5OJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 67ASP 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5OJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 117Right-handed 310
Helix 2
AA2
A
118 131Right-handed alpha
Helix 3
AA3
A
133 142Right-handed alpha
Helix 4
AA4
A
152 154Right-handed 310
Helix 5
AA5
A
159 173Right-handed alpha
Helix 6
AA6
A
194 199Right-handed alpha
Helix 7
AA7
A
218 223Right-handed alpha
Helix 8
AA8
A
223 229Right-handed alpha
Helix 9
AA9
A
266 284Right-handed alpha
Helix 10
AB1
A
335 338Right-handed 310
Helix 11
AB2
A
339 350Right-handed alpha
Helix 12
AB3
A
373 378Right-handed alpha
Helix 13
AB4
A
388 394Right-handed alpha
Helix 14
AB5
A
396 408Right-handed alpha
Helix 15
AB6
A
408 419Right-handed alpha
Helix 16
AB7
A
441 449Right-handed alpha
Helix 17
AB8
A
457 470Right-handed alpha
Helix 18
AB9
A
504 521Right-handed alpha
Helix 19
AC1
A
599 615Right-handed alpha
Helix 20
AC2
A
616 618Right-handed 310
Helix 21
AC3
A
624 628Right-handed 310
Helix 22
AC4
A
645 655Right-handed alpha
Helix 23
AC5
A
703 714Right-handed alpha
Helix 24
AC6
A
737 741Right-handed 310
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There are 9 sheets in PDB entry 5OJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
178 187anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 158first strand
Strand 2
A
86 99anti-parallel
Strand 3
A
79 80anti-parallel
Strand 4
A
260 262parallel
Strand 5
A
482 485anti-parallel
Strand 6
A
490 493anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 205first strand
Strand 2
A
211 217anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 307first strand
Strand 2
A
288 295anti-parallel
Strand 3
A
583 591anti-parallel
Strand 4
A
568 576anti-parallel
Strand 5
A
545 548anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
385 387anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
370 371anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 475first strand
Strand 2
A
498 500anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
659 663first strand
Strand 2
A
685 690parallel
Strand 3
A
669 672anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 719first strand
Strand 2
A
743 749parallel
Strand 3
A
726 730anti-parallel
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