Analysis of interatomic Contacts of Structural Units in PDB entry:
5OJ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OJ8 entry

There is 1 chain in PDB entry 5OJ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 209SER 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5OJ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
210 226Right-handed alpha
Helix 2
AA2
A
228 248Right-handed alpha
Helix 3
AA3
A
251 268Right-handed alpha
Helix 4
AA4
A
270 290Right-handed alpha
Helix 5
AA5
A
293 310Right-handed alpha
Helix 6
AA6
A
312 332Right-handed alpha
Helix 7
AA7
A
335 351Right-handed alpha
Helix 8
AA8
A
354 373Right-handed alpha
Helix 9
AA9
A
377 395Right-handed alpha
Helix 10
AB1
A
396 416Right-handed alpha
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There are no sheets in PDB entry 5OJ8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il