Analysis of interatomic Contacts of Structural Units in PDB entry:
5OJF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OJF entry

There are 3 chains in PDB entry 5OJF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 194ARG 479
B
 ILE 194ARG 479
C
 ILE 194ARG 479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 5OJF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
198 208Right-handed alpha
Helix 2
AA2
A
213 232Right-handed alpha
Helix 3
AA3
A
236 253Right-handed alpha
Helix 4
AA4
A
255 274Right-handed alpha
Helix 5
AA5
A
278 295Right-handed alpha
Helix 6
AA6
A
301 316Right-handed alpha
Helix 7
AA7
A
320 336Right-handed alpha
Helix 8
AA8
A
339 358Right-handed alpha
Helix 9
AA9
A
362 379Right-handed alpha
Helix 10
AB1
A
381 401Right-handed alpha
Helix 11
AB2
A
410 419Right-handed alpha
Helix 12
AB3
A
446 462Right-handed alpha
Helix 13
AB4
A
464 478Right-handed alpha
Helix 14
AB5
B
198 208Right-handed alpha
Helix 15
AB6
B
213 232Right-handed alpha
Helix 16
AB7
B
236 253Right-handed alpha
Helix 17
AB8
B
255 274Right-handed alpha
Helix 18
AB9
B
278 295Right-handed alpha
Helix 19
AC1
B
301 316Right-handed alpha
Helix 20
AC2
B
320 336Right-handed alpha
Helix 21
AC3
B
339 358Right-handed alpha
Helix 22
AC4
B
362 379Right-handed alpha
Helix 23
AC5
B
381 401Right-handed alpha
Helix 24
AC6
B
410 419Right-handed alpha
Helix 25
AC7
B
446 462Right-handed alpha
Helix 26
AC8
B
464 478Right-handed alpha
Helix 27
AC9
C
198 208Right-handed alpha
Helix 28
AD1
C
213 232Right-handed alpha
Helix 29
AD2
C
236 253Right-handed alpha
Helix 30
AD3
C
255 274Right-handed alpha
Helix 31
AD4
C
278 295Right-handed alpha
Helix 32
AD5
C
297 316Right-handed alpha
Helix 33
AD6
C
320 336Right-handed alpha
Helix 34
AD7
C
339 358Right-handed alpha
Helix 35
AD8
C
362 379Right-handed alpha
Helix 36
AD9
C
381 401Right-handed alpha
Helix 37
AE1
C
410 419Right-handed alpha
Helix 38
AE2
C
446 463Right-handed alpha
Helix 39
AE3
C
464 478Right-handed alpha
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There are no sheets in PDB entry 5OJF
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