Analysis of interatomic Contacts of Structural Units in PDB entry:
5OJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OJG entry

There are 2 chains in PDB entry 5OJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 260
B
 MET 1LEU 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5OJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 33Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
71 87Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
109 121Right-handed alpha
Helix 6
AA6
A
121 138Right-handed alpha
Helix 7
AA7
A
148 152Right-handed 310
Helix 8
AA8
A
158 180Right-handed alpha
Helix 9
AA9
A
199 204Right-handed alpha
Helix 10
AB1
A
208 218Right-handed alpha
Helix 11
AB2
A
227 239Right-handed alpha
Helix 12
AB3
A
240 243Right-handed 310
Helix 13
AB4
B
20 33Right-handed alpha
Helix 14
AB5
B
43 57Right-handed alpha
Helix 15
AB6
B
71 87Right-handed alpha
Helix 16
AB7
B
104 108Right-handed 310
Helix 17
AB8
B
109 121Right-handed alpha
Helix 18
AB9
B
121 138Right-handed alpha
Helix 19
AC1
B
148 152Right-handed 310
Helix 20
AC2
B
158 180Right-handed alpha
Helix 21
AC3
B
199 204Right-handed alpha
Helix 22
AC4
B
206 217Right-handed alpha
Helix 23
AC5
B
227 239Right-handed alpha
Helix 24
AC6
B
240 243Right-handed 310
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There are 2 sheets in PDB entry 5OJG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
36 41parallel
Strand 3
A
12 15parallel
Strand 4
A
91 94parallel
Strand 5
A
141 146parallel
Strand 6
A
184 191parallel
Strand 7
A
249 252parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
36 41parallel
Strand 3
B
12 15parallel
Strand 4
B
91 94parallel
Strand 5
B
141 146parallel
Strand 6
B
184 191parallel
Strand 7
B
249 252parallel
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