Analysis of interatomic Contacts of Structural Units in PDB entry:
5OKZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5OKZ entry

There are 6 chains in PDB entry 5OKZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
m
 PRO 8PRO 291
A
 LYS 3LEU 297
B
 ARG 3SER 244
C
 THR 16ASN 393
D
 SER 2VAL 222
E
 HIS 0VAL 67
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are216 helices in PDB entry 5OKZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
m
208 210Right-handed 310
Helix 2
AA2
m
219 223Right-handed 310
Helix 3
AA3
A
8 21Right-handed alpha
Helix 4
AA4
A
84 88Right-handed 310
Helix 5
AA5
A
98 113Right-handed alpha
Helix 6
AA6
A
146 162Right-handed alpha
Helix 7
AA7
A
206 211Right-handed alpha
Helix 8
AA8
A
224 231Right-handed alpha
Helix 9
AA9
A
258 296Right-handed alpha
Helix 10
AB1
B
93 110Right-handed alpha
Helix 11
AB2
B
113 117Right-handed 310
Helix 12
AB3
B
134 150Right-handed alpha
Helix 13
AB4
B
175 182Right-handed alpha
Helix 14
AB5
B
209 243Right-handed alpha
Helix 15
AB6
C
18 26Right-handed alpha
Helix 16
AB7
C
26 37Right-handed alpha
Helix 17
AB8
C
123 127Right-handed 310
Helix 18
AB9
C
145 162Right-handed alpha
Helix 19
AC1
C
166 171Right-handed 310
Helix 20
AC2
C
226 240Right-handed alpha
Helix 21
AC3
C
287 291Right-handed 310
Helix 22
AC4
C
335 343Right-handed alpha
Helix 23
AC5
C
370 392Right-handed alpha
Helix 24
AC6
D
60 75Right-handed alpha
Helix 25
AC7
D
76 78Right-handed 310
Helix 26
AC8
D
79 83Right-handed 310
Helix 27
AC9
D
105 123Right-handed alpha
Helix 28
AD1
D
150 156Right-handed alpha
Helix 29
AD2
D
187 218Right-handed alpha
Helix 30
AD3
D
219 221Right-handed 310
Helix 31
AD4
E
4 16Right-handed alpha
Helix 32
AD5
E
89 104Right-handed alpha
Helix 33
AD6
E
110 115Right-handed 310
Helix 34
AD7
E
137 151Right-handed alpha
Helix 35
AD8
E
202 209Right-handed alpha
Helix 36
AD9
E
240 263Right-handed alpha
Helix 37
AE1
F
106 122Right-handed alpha
Helix 38
AE2
F
126 130Right-handed 310
Helix 39
AE3
F
164 183Right-handed alpha
Helix 40
AE4
F
222 247Right-handed alpha
Helix 41
AE5
G
159 169Right-handed alpha
Helix 42
AE6
G
172 180Right-handed alpha
Helix 43
AE7
G
200 217Right-handed alpha
Helix 44
AE8
G
219 221Right-handed 310
Helix 45
AE9
G
222 237Right-handed alpha
Helix 46
AF1
H
139 141Right-handed 310
Helix 47
AF2
H
152 157Right-handed 310
Helix 48
AF3
H
158 162Right-handed 310
Helix 49
AF4
H
203 207Right-handed 310
Helix 50
AF5
H
237 243Right-handed alpha
Helix 51
AF6
H
290 310Right-handed alpha
Helix 52
AF7
H
315 326Right-handed alpha
Helix 53
AF8
H
327 329Right-handed 310
Helix 54
AF9
H
331 336Right-handed 310
Helix 55
AG1
H
337 355Right-handed alpha
Helix 56
AG2
I
208 210Right-handed 310
Helix 57
AG3
I
219 223Right-handed 310
Helix 58
AG4
K
8 21Right-handed alpha
Helix 59
AG5
K
84 88Right-handed 310
Helix 60
AG6
K
98 113Right-handed alpha
Helix 61
AG7
K
146 162Right-handed alpha
Helix 62
AG8
K
206 211Right-handed alpha
Helix 63
AG9
K
224 231Right-handed alpha
Helix 64
AH1
K
258 297Right-handed alpha
Helix 65
AH2
L
92 110Right-handed alpha
Helix 66
AH3
L
113 117Right-handed 310
Helix 67
AH4
L
134 150Right-handed alpha
Helix 68
AH5
L
175 182Right-handed alpha
Helix 69
AH6
L
209 241Right-handed alpha
Helix 70
AH7
M
21 26Right-handed alpha
Helix 71
AH8
M
26 37Right-handed alpha
Helix 72
AH9
M
123 127Right-handed 310
Helix 73
AI1
M
145 162Right-handed alpha
Helix 74
AI2
M
166 171Right-handed 310
Helix 75
AI3
M
226 240Right-handed alpha
Helix 76
AI4
M
287 291Right-handed 310
Helix 77
AI5
M
335 343Right-handed alpha
Helix 78
AI6
M
370 392Right-handed alpha
Helix 79
AI7
N
60 75Right-handed alpha
Helix 80
AI8
N
76 78Right-handed 310
Helix 81
AI9
N
79 83Right-handed 310
Helix 82
AJ1
N
105 124Right-handed alpha
Helix 83
AJ2
N
150 156Right-handed alpha
Helix 84
AJ3
N
187 218Right-handed alpha
Helix 85
AJ4
N
219 221Right-handed 310
Helix 86
AJ5
O
4 16Right-handed alpha
Helix 87
AJ6
O
89 103Right-handed alpha
Helix 88
AJ7
O
110 115Right-handed 310
Helix 89
AJ8
O
137 151Right-handed alpha
Helix 90
AJ9
O
202 209Right-handed alpha
Helix 91
AK1
O
240 263Right-handed alpha
Helix 92
AK2
P
106 122Right-handed alpha
Helix 93
AK3
P
126 130Right-handed 310
Helix 94
AK4
P
164 183Right-handed alpha
Helix 95
AK5
P
222 247Right-handed alpha
Helix 96
AK6
Q
159 169Right-handed alpha
Helix 97
AK7
Q
173 180Right-handed alpha
Helix 98
AK8
Q
200 217Right-handed alpha
Helix 99
AK9
Q
219 221Right-handed 310
Helix 100
AL1
Q
222 233Right-handed alpha
Helix 101
AL2
R
158 162Right-handed 310
Helix 102
AL3
R
203 207Right-handed 310
Helix 103
AL4
R
237 244Right-handed alpha
Helix 104
AL5
R
290 310Right-handed alpha
Helix 105
AL6
R
315 326Right-handed alpha
Helix 106
AL7
R
327 329Right-handed 310
Helix 107
AL8
R
331 336Right-handed 310
Helix 108
AL9
R
337 355Right-handed alpha
Helix 109
AM1
S
208 210Right-handed 310
Helix 110
AM2
S
219 223Right-handed 310
Helix 111
AM3
U
8 21Right-handed alpha
Helix 112
AM4
U
84 88Right-handed 310
Helix 113
AM5
U
98 113Right-handed alpha
Helix 114
AM6
U
119 124Right-handed alpha
Helix 115
AM7
U
146 162Right-handed alpha
Helix 116
AM8
U
206 211Right-handed alpha
Helix 117
AM9
U
224 231Right-handed alpha
Helix 118
AN1
U
258 297Right-handed alpha
Helix 119
AN2
V
90 110Right-handed alpha
Helix 120
AN3
V
113 117Right-handed 310
Helix 121
AN4
V
134 150Right-handed alpha
Helix 122
AN5
V
175 182Right-handed alpha
Helix 123
AN6
V
209 243Right-handed alpha
Helix 124
AN7
W
18 26Right-handed alpha
Helix 125
AN8
W
26 37Right-handed alpha
Helix 126
AN9
W
123 127Right-handed 310
Helix 127
AO1
W
145 162Right-handed alpha
Helix 128
AO2
W
166 171Right-handed 310
Helix 129
AO3
W
226 240Right-handed alpha
Helix 130
AO4
W
287 291Right-handed 310
Helix 131
AO5
W
335 343Right-handed alpha
Helix 132
AO6
W
370 392Right-handed alpha
Helix 133
AO7
X
60 75Right-handed alpha
Helix 134
AO8
X
76 78Right-handed 310
Helix 135
AO9
X
79 83Right-handed 310
Helix 136
AP1
X
105 123Right-handed alpha
Helix 137
AP2
X
150 156Right-handed alpha
Helix 138
AP3
X
187 218Right-handed alpha
Helix 139
AP4
X
219 221Right-handed 310
Helix 140
AP5
Y
4 16Right-handed alpha
Helix 141
AP6
Y
89 104Right-handed alpha
Helix 142
AP7
Y
110 115Right-handed 310
Helix 143
AP8
Y
137 151Right-handed alpha
Helix 144
AP9
Y
202 208Right-handed alpha
Helix 145
AQ1
Y
240 264Right-handed alpha
Helix 146
AQ2
Z
106 122Right-handed alpha
Helix 147
AQ3
Z
126 130Right-handed 310
Helix 148
AQ4
Z
164 183Right-handed alpha
Helix 149
AQ5
Z
222 247Right-handed alpha
Helix 150
AQ6
a
159 169Right-handed alpha
Helix 151
AQ7
a
173 180Right-handed alpha
Helix 152
AQ8
a
200 217Right-handed alpha
Helix 153
AQ9
a
219 221Right-handed 310
Helix 154
AR1
a
222 235Right-handed alpha
Helix 155
AR2
b
139 141Right-handed 310
Helix 156
AR3
b
158 162Right-handed 310
Helix 157
AR4
b
203 207Right-handed 310
Helix 158
AR5
b
237 243Right-handed alpha
Helix 159
AR6
b
290 310Right-handed alpha
Helix 160
AR7
b
315 326Right-handed alpha
Helix 161
AR8
b
327 329Right-handed 310
Helix 162
AR9
b
331 336Right-handed 310
Helix 163
AS1
b
337 355Right-handed alpha
Helix 164
AS2
c
208 210Right-handed 310
Helix 165
AS3
c
219 223Right-handed 310
Helix 166
AS4
e
8 21Right-handed alpha
Helix 167
AS5
e
84 88Right-handed 310
Helix 168
AS6
e
98 113Right-handed alpha
Helix 169
AS7
e
146 162Right-handed alpha
Helix 170
AS8
e
206 211Right-handed alpha
Helix 171
AS9
e
224 231Right-handed alpha
Helix 172
AT1
e
258 297Right-handed alpha
Helix 173
AT2
f
95 110Right-handed alpha
Helix 174
AT3
f
113 117Right-handed 310
Helix 175
AT4
f
134 150Right-handed alpha
Helix 176
AT5
f
175 182Right-handed alpha
Helix 177
AT6
f
209 243Right-handed alpha
Helix 178
AT7
g
18 26Right-handed alpha
Helix 179
AT8
g
26 37Right-handed alpha
Helix 180
AT9
g
123 127Right-handed 310
Helix 181
AU1
g
145 162Right-handed alpha
Helix 182
AU2
g
166 171Right-handed 310
Helix 183
AU3
g
226 240Right-handed alpha
Helix 184
AU4
g
287 291Right-handed 310
Helix 185
AU5
g
335 343Right-handed alpha
Helix 186
AU6
g
370 392Right-handed alpha
Helix 187
AU7
h
60 75Right-handed alpha
Helix 188
AU8
h
76 78Right-handed 310
Helix 189
AU9
h
79 83Right-handed 310
Helix 190
AV1
h
105 124Right-handed alpha
Helix 191
AV2
h
150 156Right-handed alpha
Helix 192
AV3
h
187 218Right-handed alpha
Helix 193
AV4
h
219 221Right-handed 310
Helix 194
AV5
i
4 16Right-handed alpha
Helix 195
AV6
i
89 104Right-handed alpha
Helix 196
AV7
i
110 115Right-handed 310
Helix 197
AV8
i
137 151Right-handed alpha
Helix 198
AV9
i
202 209Right-handed alpha
Helix 199
AW1
i
240 263Right-handed alpha
Helix 200
AW2
j
106 122Right-handed alpha
Helix 201
AW3
j
126 130Right-handed 310
Helix 202
AW4
j
164 183Right-handed alpha
Helix 203
AW5
j
222 247Right-handed alpha
Helix 204
AW6
k
159 169Right-handed alpha
Helix 205
AW7
k
173 180Right-handed alpha
Helix 206
AW8
k
200 218Right-handed alpha
Helix 207
AW9
k
219 221Right-handed 310
Helix 208
AX1
k
222 235Right-handed alpha
Helix 209
AX2
l
158 162Right-handed 310
Helix 210
AX3
l
203 207Right-handed 310
Helix 211
AX4
l
237 242Right-handed alpha
Helix 212
AX5
l
290 310Right-handed alpha
Helix 213
AX6
l
315 326Right-handed alpha
Helix 214
AX7
l
327 329Right-handed 310
Helix 215
AX8
l
331 336Right-handed 310
Helix 216
AX9
l
337 355Right-handed alpha
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